Spiroplasma chrysopicola: SCHRY_v1c01770
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Entry
SCHRY_v1c01770 CDS
T02676
Symbol
topA1
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scr
Spiroplasma chrysopicola
Brite
KEGG Orthology (KO) [BR:
scr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scr03032
]
SCHRY_v1c01770 (topA1)
03400 DNA repair and recombination proteins [BR:
scr03400
]
SCHRY_v1c01770 (topA1)
Enzymes [BR:
scr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SCHRY_v1c01770 (topA1)
DNA replication proteins [BR:
scr03032
]
Prokaryotic type
DNA Topoisomerases
SCHRY_v1c01770 (topA1)
DNA repair and recombination proteins [BR:
scr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCHRY_v1c01770 (topA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_InsA
Toprim_4
GH101_dom-5
DUF5795
Toprim_2
Motif
Other DBs
NCBI-GeneID:
16152057
NCBI-ProteinID:
AGM24762
UniProt:
R4U0I7
LinkDB
All DBs
Position
198791..200797
Genome browser
AA seq
668 aa
AA seq
DB search
MSNTLVIMESPTKTKAVQKYLGEGFIVLSSEGHIRNLATTGDFGLGVDINTFEPKYKMER
NKKELVKQLKGLAKTAQLVVLATDPDREGEAIAYHLNEVLGCQEKSKRVRFNEITKDAVL
TAFENQTEIDMNLVKSQEARRILDRFIGFRLSKLLQKKIRSKSAGRVQSVALKLVVEREK
EWQSFIPEEYWTIEGTYKKATVKLSKYNNQKLELKTEAEILKIKTEITNQFIVTEIKEQE
RQRKSPNPHTTSTMLQEASSKLGFVSNKTSLIAQQLYEGIKVNDNITGFITYPRTDSIRL
SDKFTQDAFDYISINYGKEYLGEVKTSAKKKNIQDAHEAIRPTDLTMTPEQAKDYLTRDQ
LRLYKIIYARSLASLMASAKLIGKTIFLTNNAYEFKMTGSTVAFSGFLKCYVFDDESDDE
IIKLPNLKVDQTIELDDLYGLRHFTKPPSRYSEAKLIKLLEEIGVGRPSTYAPIMRTLKE
RGYIIVENKSIKATEKGILTSDKLQEFFNDIINESYTSSIEESLDVISNGKLEPKPLLKE
FWERFEPRIEAAMELMEEIPIEKAGIDCPNCGLDLVYRYGKYGKFIACSGFPKCRYIHQT
GPKFGQCPACGTGEIILKFNKRHQRFKACTNYPNCEYTDSYQEPKNSSGEEDQNEETDQN
GLYRIKII
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacacattagtaattatggaatcaccaactaaaactaaagctgttcaaaaatat
ttaggcgagggttttattgttttatcatcggaaggccatattagaaacttagcaacaact
ggtgattttggtttaggagttgatattaatacttttgaaccaaaatataagatggaacgt
aataaaaaagaacttgttaagcaactaaaagggttagctaaaacagcacaattagttgtt
ctggcaactgaccctgatcgtgaaggggaagcaattgcttatcatttaaatgaagtatta
ggttgtcaagaaaaatcaaagcgagtacgatttaatgagattaccaaagatgctgtttta
acagcatttgaaaaccaaacagaaattgatatgaatttagtaaaatcacaagaagcacgc
cgaattttagatcgttttattggttttcggttaagtaaattattacaaaaaaagattaga
tcaaaatcagcaggtcgtgtccaatctgttgcgttgaaattagttgttgaacgggaaaaa
gaatgacaaagttttattccggaagaatactgaactattgaaggaacatataaaaaagcg
accgttaaattaagtaaatataataatcaaaaactagagttaaaaacagaagctgaaatt
ttaaaaattaaaacagaaattactaaccaattcattgtgactgaaattaaagaacaagaa
cgccagcgaaaatcaccaaatccccatacaacttcaacaatgctacaagaagctagcagt
aaattgggatttgtttcaaataaaacgtccttaattgctcaacaattatatgaaggaatt
aaagttaatgataatattactgggtttattacttacccgcgaacagattcaattcgttta
agtgataaatttacccaagatgcatttgattatattagcattaattatggcaaagaatat
cttggtgaagtaaaaactagtgcaaaaaagaaaaatattcaagatgcccatgaagcaatt
cgcccaactgatttaacaatgactccggaacaagcaaaagattatttaacacgtgatcaa
ttacggttatataaaattatttatgctcgtagtttagctagtttaatggcaagtgcgaaa
ttaattgggaaaacaattttcctaacaaataatgcatatgaatttaaaatgacgggaagt
actgttgcttttagcgggtttttaaaatgttatgtgtttgatgatgaaagtgacgatgaa
attattaaattaccaaatttaaaagttgatcaaacaattgaactggatgatttatacggt
cttcgtcattttacaaaacccccaagtcgttattcggaagcaaaactgattaaattgtta
gaagaaattggggttggtcgcccctcaacttatgcaccaattatgcggacattaaaagaa
cgtggttatattattgttgaaaataaaagcattaaagcaactgaaaaagggattttaact
agtgataaactacaagagttctttaatgacattattaatgaaagttatacttcttcaatt
gaagaatcattagatgttatttcaaatggaaagttagagccaaaaccattattaaaagag
ttttgggagcgctttgaaccacgaattgaagcggcaatggaattaatggaagaaattcca
attgaaaaggcaggaattgactgccctaattgtggccttgatttagtttatcgttatggt
aaatatggtaaatttattgcttgttcaggctttccaaaatgtcgttatattcatcaaacc
ggaccaaaatttgggcaatgtcctgcttgcggaactggggaaattattttgaagtttaat
aaacgccaccagcgttttaaagcttgtacgaattatcctaattgtgaatatactgattcg
tatcaagaaccaaagaatagttctggtgaagaagatcaaaacgaagaaacagaccaaaac
ggattatatcgaattaaaattatttaa
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