Spiroplasma chrysopicola: SCHRY_v1c02200
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Entry
SCHRY_v1c02200 CDS
T02676
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scr
Spiroplasma chrysopicola
Pathway
scr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCHRY_v1c02200 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scr03021
]
SCHRY_v1c02200 (rpoA)
03400 DNA repair and recombination proteins [BR:
scr03400
]
SCHRY_v1c02200 (rpoA)
Enzymes [BR:
scr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCHRY_v1c02200 (rpoA)
Transcription machinery [BR:
scr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCHRY_v1c02200 (rpoA)
DNA repair and recombination proteins [BR:
scr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCHRY_v1c02200 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
Spectrin_7
DUF4085
ATG14
Motif
Other DBs
NCBI-GeneID:
16151909
NCBI-ProteinID:
AGM24805
UniProt:
R4UF97
LinkDB
All DBs
Position
231525..232478
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AA seq
317 aa
AA seq
DB search
MKQFIRPEFKLQAEDKTNNYGKFLVEPLERGFGITLGNAIRRTLLSATPGAAVFAVRIKG
ASHEFTAIPGVVEHVTKIILNIKNLVLIINQDIIPDGESVILKISSTKEGEVLAKDIILP
AGVEVVNQNLHIATISKGGSLEIELHARNSRGYKSFNDNKKEKKYADLIVIDSNYSPIEK
VSYKVEPTKVGKNADLEKLELEVQTDSSITPVNAVAMAAKVLTEHLEFFVNLNEAIKATQ
IISSETETEEDELDRSIDELEFTQRSQNCLKRAKIDTLRDLVSKTEDEIQQIRNLGKKSL
TEIKEKVAQLGLHFRRD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatttattagacctgaatttaaattacaagctgaagataaaacaaataattat
ggtaagtttttagttgaaccattagaacgaggttttggaataactttaggtaatgctatt
cgccgaacattattatcagcaacaccaggagcagcagtttttgctgttcgtatcaaagga
gcatcacatgaatttaccgcaattcccggcgttgttgaacatgtaacaaaaattatttta
aacattaaaaatttagtgttaattattaaccaagatattattcctgacggagaatcagta
atcttaaaaatttcttcaacaaaagaaggagaagttttagcaaaagatattattttgcca
gctggagttgaagttgttaaccaaaatcttcatattgccacaatttcaaaaggtgggagt
ttagaaattgaattacatgctcgtaattcacgtgggtataaatcatttaatgacaataaa
aaagaaaaaaagtatgctgatttaattgtaattgattcaaattattcaccaattgaaaaa
gtttcttataaagtagaaccaacaaaagttgggaaaaatgctgatttagaaaaattagaa
ttagaagtgcaaacagatagctcaattactccggttaatgccgtagcaatggcagcgaaa
gtattaacagagcacttagaattctttgttaacttaaatgaagcaattaaagcaacgcaa
attatttcatcggaaactgaaacagaagaagatgaattagaccgtagtattgatgagtta
gagtttacgcaacgttcacaaaattgcttaaaacgagcaaaaattgatacattacgtgac
ttagtttcaaaaacagaagatgaaattcaacaaatccgtaatttagggaaaaaatcatta
acagaaattaaagaaaaagttgcccaattagggttacactttagaagagattag
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