Spiroplasma chrysopicola: SCHRY_v1c02250
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Entry
SCHRY_v1c02250 CDS
T02676
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scr
Spiroplasma chrysopicola
Pathway
scr03420
Nucleotide excision repair
scr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCHRY_v1c02250 (pcrA)
03430 Mismatch repair
SCHRY_v1c02250 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scr03400
]
SCHRY_v1c02250 (pcrA)
Enzymes [BR:
scr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCHRY_v1c02250 (pcrA)
DNA repair and recombination proteins [BR:
scr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCHRY_v1c02250 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SCHRY_v1c02250 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_12
AAA_30
Viral_helicase1
ResIII
PcrA_UvrD_tudor
DUF4284
Motif
Other DBs
NCBI-GeneID:
16152296
NCBI-ProteinID:
AGM24810
UniProt:
R4UFA0
LinkDB
All DBs
Position
235538..237745
Genome browser
AA seq
735 aa
AA seq
DB search
MLNEFITNLNPNQREAVLAIKGPVRIIAGAGSGKTRVIINKIAYLIKYGNLKPWRICAVT
FTNKAANEMKERIIDLIGSDGKQCSISTYHALCVRILREDIDTLGYNRNFNIIDNQDQDS
IFRIIYKKMDYKYDNNEAKLLKSALSNWKNDFISPASASANNSDNPNARRWAHVYKLYQE
RLLELNSLDFNDLILLTYQLFRDHLTVLAKWQGRFDYFLVDEFQDTNDLQFSIIKWLTGE
QQNITVVGDPDQTIYSWRGAKISLILNFDREFKNTETVILDQNYRSSQNILNLANSLIEN
NPNRIKKELFTANQSGIKPILYHGHSGGDEAEFVAGKIHTLVKNEEVRYQDILILYRANY
LSRDIEGALADYGISYHIYGAFKFYERKEIKDALSFLRLLVNNDPLALQRVLLLFPKVGE
KTIEHFFELIATEHLTGSDLLINHHELLGTGLANKLEPLKKALIAGQKALQEEKTIGEVL
EQLLKESGYLQLLKDNFEEERVENIKELFNSIKKFDQQNSDLNGIDLVNEYLQLMALQTD
NDNNLVSEDAVALMTIHNAKGLEKKVVFIIGLNEGIFPSAQAIRGGASQMEEERRTFYVA
ITRAKEQLFISYADGFSYITNNERFPSRFIKELNENYFDLIETEHTKPESKYIDKFQNFK
KDWRISLEDFGSQKYLKNKETDAVKNQWKINDTVNHELFGTGVVVKIIAQNIQIVFPSPI
GSKIISADSKAITKG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgaatttattacaaacttgaatccaaatcaacgcgaggcggttttagcaatt
aaaggccccgttcggattattgcgggggcgggaagcggcaaaacccgagttattattaat
aaaattgcttatttaattaaatatggtaatttgaaaccatgaagaatttgtgctgtaaca
tttaccaataaagccgcaaatgaaatgaaagaacgtattattgacttgattggttcagat
ggtaaacaatgtagtatttcaacctatcacgccttatgtgtgcggattttgcgagaagat
attgatacattaggttataatcgtaatttcaatattattgataatcaagaccaagatagt
atttttagaataatctataaaaaaatggattataagtatgataataatgaggcaaagttg
ttaaaaagtgccttgtcaaattgaaagaatgattttatttccccggctagtgcaagcgcc
aacaacagcgataatccaaatgcgcgtcgctgagcccatgtctataaactatatcaagaa
cggttgctagaattaaatagtttagattttaatgatttaattttattaacttaccaatta
tttcgtgatcatttaacagtgttagcaaaatgacaaggtcgttttgattattttttagtt
gatgagtttcaagatacaaatgatttacaatttagtattattaagtgattaactggtgaa
caacaaaatattactgttgttggtgaccctgatcaaacgatttattcatgacgaggagca
aaaattagtttaatcttaaactttgatcgggaatttaaaaataccgaaacagttattctt
gatcaaaattatcgttcaagtcaaaatattttaaatttagctaatagtttaattgaaaat
aatccaaatcggattaaaaaagaattgtttacagctaatcaaagtgggattaaaccaatt
ttatatcatggtcatagtggcggggatgaagctgaatttgttgctgggaaaattcacacc
cttgttaaaaatgaagaggtgcgctaccaagacattttaattttatatcgtgctaattat
ttatcacgcgatattgaaggtgccttagctgactatgggatttcttaccatatttatggt
gcctttaaattttatgaacgtaaagaaattaaggatgccttatcttttttacgcttatta
gttaataatgatccgttagctttacaacgggtgttattattatttccaaaagtaggggaa
aaaactattgaacatttttttgaactgattgcaacagaacacctaacaggtagtgactta
ttaattaatcatcatgaactactagggacaggtttagcaaacaaattagaaccactaaaa
aaagccttaatagctgggcaaaaagctctgcaagaagaaaaaacaattggggaagtgtta
gaacaattgctaaaagaaagtggttatttacaacttttaaaagataactttgaagaggaa
cgcgttgaaaatattaaagaattatttaattcaattaaaaaatttgatcaacaaaatagt
gatttaaatggaattgatttagttaatgaatatctccaattaatggcgctgcaaactgat
aatgataataatttagtatcagaagatgctgttgcattaatgacaattcataatgcgaag
ggattagaaaaaaaagttgttttcattattggcctaaatgaagggatttttccctcggct
caagcgattcgcggaggggcaagccaaatggaagaagaaagacgaacattttatgttgca
attacaagagcaaaagagcaattatttattagttatgctgatggcttttcttatattact
aataatgaacggttcccatcacgctttattaaagaactaaatgaaaattattttgattta
atagaaactgaacatacaaaaccagaatcaaaatatattgataagtttcaaaactttaaa
aaggattgaagaattagcttagaggattttggttcacaaaaatacttaaaaaataaagaa
acagatgctgttaaaaatcagtgaaaaattaatgatacagttaaccatgaattatttgga
acgggggtagttgttaaaattattgctcaaaatattcaaattgtctttccgtccccaatt
ggttcaaagattatttccgctgatagtaaggcaattacaaagggataa
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