Spiroplasma chrysopicola: SCHRY_v1c04070
Help
Entry
SCHRY_v1c04070 CDS
T02676
Symbol
oppD
Name
(GenBank) oligopeptide ABC transporter ATP-binding protein
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
scr
Spiroplasma chrysopicola
Pathway
scr02010
ABC transporters
scr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCHRY_v1c04070 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCHRY_v1c04070 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCHRY_v1c04070 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scr02000
]
SCHRY_v1c04070 (oppD)
Transporters [BR:
scr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SCHRY_v1c04070 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
TniB
AAA_22
AAA_16
NPHP3_N
RNA_helicase
Cmyb_C
PRK
AAA_29
ATPase
Motif
Other DBs
NCBI-GeneID:
16151695
NCBI-ProteinID:
AGM24989
UniProt:
R4UAQ1
LinkDB
All DBs
Position
449772..451463
Genome browser
AA seq
563 aa
AA seq
DB search
MSNEVIISIKDLVINFKTRANILTAIRNISFDIYDGETLAIVGESGSGKSVMTKTFTNML
EKNGWINSGEIIYYPSQNSLADQNTYFRKPVDLVEFSKISLENNLIKTILKYNRRLIKSL
NHQITDFNKMTIANLDAKILQLTTTIKELKAKIDFKASHKLAKIITACEVELDKFTNFKI
ILTDQEKYDQAIKRLQQKIALAEAEIKKVLRLNLKDRIFLKSNLKILKNYLENNQKIKAS
HQQRISRYFAKKQFTTPFLEKVQQFNIEMFNGQELATQNFNDLLEQWEPIKSFDFINKKR
LAKQITKLRGQTIATIFQDPMTSLNPLLSVGFQISEVIRKHRKLNRAQAKQEAILLLEKV
GIKNAKKRYHDIPGMYSGGMRQRVVIAIALACQPKILICDEPTTALDVTIQAQILDLIKE
LQKEYKFTIIFITHDLGVVATIADRVAVMYAGQIIEYGKVDELFFDSRHPYTWALLSSLP
QFGAKGEELYSIPGSPPSLYTKVVGDPFAPRNKYAMKIDYLIEPPMFEVTPSHYAKTWLL
DSRAPKVARPKQLKDLDNIIQND
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacgaagtaatcatttcaattaaagatttagtaattaattttaaaaccagagca
aatattctaacggcgattcgtaatatttcttttgacatttatgatggagaaacattagca
attgttggggaatcaggtagtggaaagtcagttatgacaaaaacttttactaatatgtta
gaaaaaaatggttgaattaatagtggagagattatttattatccatcacaaaatagttta
gctgatcaaaatacatattttcgtaagccagttgatttagttgagtttagcaaaatttct
ttggaaaataatttaattaaaactattttaaaatataatcgtcgcttaattaaaagttta
aatcatcaaattactgattttaataaaatgacaattgctaatcttgatgcaaagattttg
caattaacaacaacaattaaagaattaaaggcaaaaatagattttaaagcttctcataaa
cttgccaaaataattactgcctgcgaagtggagttagataaatttactaattttaaaata
attttaacagatcaagaaaaatatgatcaagcaatcaaacgcttgcaacaaaaaattgct
ttagcagaagcagaaattaaaaaggtcttacgattaaatttaaaagatcggatcttttta
aagagtaatttaaaaattttaaaaaactatcttgaaaataatcagaagattaaggcaagt
catcagcaacgaatctcacgttattttgcgaaaaaacaatttacaacaccttttttagaa
aaagtccaacaatttaatattgagatgtttaacggtcaagaacttgcgacccaaaatttt
aatgatttattagaacaatgagaaccaattaagagttttgattttattaataaaaaaaga
cttgctaaacaaattactaaattacggggacaaacaattgccacaatttttcaagatcca
atgacatccttaaaccctttattatctgtaggatttcaaatttcggaggtaattcgtaaa
caccgaaaattaaatcgtgctcaagcgaaacaagaagcaattttattactagaaaaagtt
ggaattaaaaatgccaaaaaacgttatcatgatattcctggaatgtattcaggaggaatg
cgccagcgagttgttattgcaattgctttagcttgccagccaaaaattttaatttgtgat
gaaccaacaacagccttagatgttacaattcaagcccaaattttggatttaattaaagaa
ttgcaaaaagaatataagtttacgattatttttattacccatgatttaggagttgttgcc
acaattgctgatcgtgtcgcggtaatgtatgctggacaaattattgagtatgggaaagtt
gatgaattattttttgattctcgtcacccatatacttgagctttattatcatcattaccc
caatttggtgcaaaaggagaagaattatattcaattcctgggtcaccgccatcactttat
acaaaagtagttggtgatccatttgcaccacggaataaatatgcgatgaaaattgattat
ttaattgaacccccaatgtttgaagtgaccccaagtcattatgcaaaaacatgactatta
gattctcgagccccaaaagtggcccgcccaaaacaattaaaagatttagacaatattatt
caaaatgattaa
DBGET
integrated database retrieval system
