Spiroplasma chrysopicola: SCHRY_v1c04880
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Entry
SCHRY_v1c04880 CDS
T02676
Symbol
phrB
Name
(GenBank) putative deoxyribodipyrimidine photolyase protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
scr
Spiroplasma chrysopicola
Brite
KEGG Orthology (KO) [BR:
scr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scr03400
]
SCHRY_v1c04880 (phrB)
Enzymes [BR:
scr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SCHRY_v1c04880 (phrB)
DNA repair and recombination proteins [BR:
scr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SCHRY_v1c04880 (phrB)
Prokaryotic type
SCHRY_v1c04880 (phrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
GGDEF_GdpP
Motif
Other DBs
NCBI-GeneID:
16152425
NCBI-ProteinID:
AGM25067
UniProt:
R4U162
LinkDB
All DBs
Position
complement(542159..543454)
Genome browser
AA seq
431 aa
AA seq
DB search
MNIFIFHRDFRIEDNFGLAQLASEEKEIYLLFIFTKVQTKDNNYFSPRSFAALVYCLKQL
QQKIHINILQSETETAAIKILIDEGQKINKIYTNRDYSPFAINRSKQMRELAKQYNFIYR
EFNDYSLVAPETIKTSQNSYYTVFTPFWNKLKLTFSNIAIATYKVSPFLGQKLKTSDLLF
DITSLPANNFNLPLTPEQVKKAIDSLEQEYQNQRDLLYLINGTANISTALKFGVVSMRQC
YLWSIEKFGNFDNPFARQLAWRDFYYQATFNAQLYQQWTFSENWNKNMTIKWTNNPDWFE
KWKNGKTGFALVDAGMKQLKATGLMHNRARMVCASFLVKNLQIDWRKGEQYFAQQLIDYD
PIINQCSWQWVAGTGFDAQPFFRIFNPELQQKKFDPQFIYCDKFLNNHEQIEKIIDYKTS
TKKALEIYHVK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttttatttttcaccgtgattttagaattgaagataattttggtcttgcccaa
ttagcaagcgaagaaaaagaaatttatttattatttatttttacaaaagttcaaacaaaa
gataataattatttttcaccccgcagttttgccgccttagtttattgtttgaagcaatta
caacaaaaaattcatattaatattcttcaaagtgaaacagaaacagccgctattaaaatt
ttaatagacgaagggcaaaagattaataaaatttatactaatcgcgattattctccattt
gcaattaaccgtagtaagcaaatgcgcgaattagcaaaacaatataattttatttaccgt
gaatttaatgattattcactagttgcaccagaaacaataaaaactagtcaaaattcgtat
tacactgtttttacaccattttgaaataaattaaaattaacatttagtaatattgctatc
gccacgtataaggtaagcccatttttagggcaaaagttaaaaacttctgatttattattt
gatattacaagtttaccagcaaataattttaatttacccttaacccctgagcaagttaaa
aaagcgattgatagtttggaacaagaataccaaaaccaaagagatttgttatatctaata
aatggaacagcaaatattagtactgctttaaaatttggggttgtttcaatgcggcaatgt
tatctttgaagcattgaaaaatttggtaattttgataatccatttgctcggcaattagca
tgaagagatttttattatcaagcaacattcaatgctcaactttatcaacaatgaactttt
agtgaaaattgaaataaaaacatgacaattaagtgaacaaataaccccgattgatttgaa
aaatgaaaaaatggcaaaacaggttttgctttagttgatgcggggatgaaacaattaaaa
gcaactggtttaatgcataatcgggcgcgaatggtttgtgcttcttttttagtcaaaaac
ttacaaattgactgacgaaagggagaacaatattttgctcagcagttaattgattatgat
ccaattattaatcaatgttcatggcaatgagtagccgggacaggttttgatgctcaacct
ttttttcggatttttaatccagaattacaacaaaaaaaatttgatccgcaatttatttat
tgtgacaaatttttaaataatcatgaacaaattgaaaaaattattgattataaaacttca
acaaaaaaggctttagaaatttaccatgtcaaataa
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