Spiroplasma chrysopicola: SCHRY_v1c05750
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Entry
SCHRY_v1c05750 CDS
T02676
Symbol
topA2
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scr
Spiroplasma chrysopicola
Brite
KEGG Orthology (KO) [BR:
scr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scr03032
]
SCHRY_v1c05750 (topA2)
03400 DNA repair and recombination proteins [BR:
scr03400
]
SCHRY_v1c05750 (topA2)
Enzymes [BR:
scr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SCHRY_v1c05750 (topA2)
DNA replication proteins [BR:
scr03032
]
Prokaryotic type
DNA Topoisomerases
SCHRY_v1c05750 (topA2)
DNA repair and recombination proteins [BR:
scr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCHRY_v1c05750 (topA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_3
Toprim_2
DUF6429
Motif
Other DBs
NCBI-GeneID:
16152382
NCBI-ProteinID:
AGM25153
UniProt:
R4U3T1
LinkDB
All DBs
Position
complement(639009..640799)
Genome browser
AA seq
596 aa
AA seq
DB search
MKYLVVLESPNKINKVKSYLEKVFPQHSFLVKASMGHITELVIKNEKYPLGIELDTMTPI
FNVVENKKDTIKQLTQFANEVDKVILATDPDREGEAIAWHLQEQLKCQNKTIRLTFNEIT
EKAIENAFSNPGQLDYQLVNAQQSRQMIDRIMGFKLSNLLQKAENLKSAGRVQSVALKLI
VDTELERKEHNKLEYWTIKQEYKDKNEIELYLDQDGKEIVKDKVLNSQEKAEQALSKITN
NLVVKEIIETEFNKNIYNAYTTSSILQDANIDLNYSSEKTTTLLQHLFENGYITYPRTDS
TRLNDDFVVAVHKFIATNYGQEYVGQYKPGKTKDNVQDAHEAIRPTNINLTLEKAKKEIA
NYDEYKLYELIYNNTLYALMANETGVKYKVLFSNNGYTFKLNFKKYHFTSYYDLQEIALD
NFNYHFKVGEIITLDSKWLAEQNFTKPSSRYTEHSLIKKLEIKGVGRPSTYATIMKTLIN
REYIKFDKKSIYPTEDGIKAHNLLQKYFSNIINEKYTADMEKVLDRIADGEINHIEFLKL
FYNNFILDFNNATNMIFKDSVKCDKCNIGYIIQRKSYKGNYFKACNNFPACKNIVS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatatttagtagtgttagaatcacctaacaaaattaataaagtaaaatcttatcta
gaaaaagtatttcctcaacatagttttcttgtaaaggcctcaatgggtcatattacagaa
ttagtaataaaaaatgaaaagtatccattgggaatagaattagatactatgactccaata
tttaatgttgtcgaaaacaaaaaagatactataaagcaattaactcaatttgctaatgaa
gttgataaagttattttagcaactgaccctgatcgagaaggagaagctattgcatggcat
ttgcaagagcaattaaaatgtcaaaataaaacaattagattaacttttaatgaaatcaca
gaaaaagcaattgaaaatgcttttagtaatcccgggcaattagattatcaattagttaat
gctcaacaatcgcgccaaatgattgatcgtattatgggctttaagttatcaaatttactc
caaaaagcagaaaatttaaaatctgctgggagagttcaatcagtagctttaaagttaatt
gtagatactgagttagaaagaaaagaacacaataagttagagtactgaactattaaacaa
gaatataaagataaaaacgaaattgaattatatttagatcaagatggtaaagaaattgtg
aaagataaagttcttaattcacaagaaaaagcagaacaagctttatctaaaattactaat
aatctagttgtaaaggaaatcattgaaaccgaattcaacaaaaatatttataacgcatat
acaacatcaagtattttacaagatgcaaatatagatctaaattattctagtgaaaaaaca
acaactctattgcaacatttattcgaaaatggatatattacttatccacgaacagactct
acaagacttaacgatgattttgtagtagcagtccataaatttattgcaacaaattatggc
caagaatatgttggtcaatataagcccggtaagactaaagataatgtgcaagatgcacat
gaagcaattcggccaacaaatattaatttaacactagaaaaagctaaaaaagaaattgct
aattacgatgaatataaattatatgaattaatttataacaataccttatatgctttaatg
gcaaatgaaactggtgttaaatataaagtattattttctaataacggatatacttttaaa
ttaaattttaaaaaatatcactttactagttattatgatttacaagaaattgctttagat
aattttaattatcattttaaagttggagaaataataactttagattcaaaatgattagct
gaacaaaattttacaaaacctagttcaagatatacagaacattcattaattaaaaaactt
gaaattaaaggtgtcggaaggccttcaacatatgccacaattatgaaaaccttaattaac
cgtgaatatattaaatttgataagaaaagcatttatcctactgaagatggtattaaagcc
cataatttattgcaaaaatatttttcaaatattattaatgaaaaatatacagctgatatg
gaaaaggtattagacagaattgcagatggagaaattaatcatattgaatttctaaaatta
ttttataataactttattttagattttaataatgcaactaacatgatatttaaagattca
gttaaatgcgataaatgtaatattggttatattattcagcgcaaaagttacaaaggtaat
tattttaaagcatgtaataactttcctgcttgcaaaaatatcgtaagttag
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