Spiroplasma chrysopicola: SCHRY_v1c05900
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Entry
SCHRY_v1c05900 CDS
T02676
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scr
Spiroplasma chrysopicola
Brite
KEGG Orthology (KO) [BR:
scr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scr03016
]
SCHRY_v1c05900 (truB)
Enzymes [BR:
scr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCHRY_v1c05900 (truB)
Transfer RNA biogenesis [BR:
scr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCHRY_v1c05900 (truB)
Prokaryotic type
SCHRY_v1c05900 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
16152524
NCBI-ProteinID:
AGM25168
UniProt:
R4U3U2
LinkDB
All DBs
Position
complement(649561..650481)
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AA seq
306 aa
AA seq
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MRTTILNDGILLIDKPVGKTSNQVIQIIKKKLGINKIGHAGTLDPLATGLLVVLLNNGTK
ISDYLLTADKGYDVTMKLFIKTDSGDITGKIIEEITPFKMKRKIIKKAFESFNGFIYEQY
PPKYSAIKVSGKKLYEYARAEQEVQITPRTVTIQSIKFKSYNHVTQTIQFSVICSKGTYV
RSLVEDIAYKMGILATVQQLTRVQSGNFKLADAVKVEDVSHNDIISMYDALFINKQPLLM
YHYDEEIRQGKPIVIINHSDPNIFIIDKHKNVLAIYKHIGKHVYACQRGLWSNEQGPTLI
SKGEKY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaacaattttaaatgatggtattttattaattgataagccagttggtaaaact
agtaaccaagttattcaaattattaagaaaaaattaggaattaataaaattggccatgct
gggacccttgatccattagcgacagggttattagtagtattattaaataatgggacgaaa
ataagtgattatttattaacagctgataaaggctatgatgtaacaatgaaattatttatt
aaaactgattctggggacataactgggaaaattatcgaggaaattacaccatttaaaatg
aaaagaaaaattattaaaaaagcttttgaaagttttaatggttttatttatgagcaatat
ccaccaaaatattcggcgataaaagtaagtggtaaaaaattatatgaatatgcccgtgct
gagcaagaggttcaaattacaccacgaacagtgacaattcaatcaattaaatttaaaagt
tataatcatgtaacacaaacaattcaatttagtgtgatttgttcaaagggaacatatgtt
cgtagtttagttgaagatattgcttataaaatggggattctggcaaccgttcaacaatta
actcgtgtacaatcaggaaattttaagttagcagatgctgttaaagttgaagatgttagc
cacaatgatattatttctatgtatgatgccttgtttattaataagcaaccattattaatg
tatcattatgatgaagaaattcgtcaaggaaaaccaattgtaattattaatcatagtgat
ccaaacatttttattattgataagcataaaaatgttttagcaatttataaacatattggt
aagcatgtatacgcttgtcaacgaggattatgatcaaatgaacaaggccctacgttaata
agtaaaggggaaaagtactaa
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