Spiroplasma chrysopicola: SCHRY_v1c08270
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Entry
SCHRY_v1c08270 CDS
T02676
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scr
Spiroplasma chrysopicola
Pathway
scr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCHRY_v1c08270 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scr03019
]
SCHRY_v1c08270 (pnp)
03016 Transfer RNA biogenesis [BR:
scr03016
]
SCHRY_v1c08270 (pnp)
Enzymes [BR:
scr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SCHRY_v1c08270 (pnp)
Messenger RNA biogenesis [BR:
scr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SCHRY_v1c08270 (pnp)
Transfer RNA biogenesis [BR:
scr03016
]
Prokaryotic type
tRNA degradation factors
SCHRY_v1c08270 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
SPATA25
FAS_AT_central
aRib
Motif
Other DBs
NCBI-GeneID:
16151660
NCBI-ProteinID:
AGM25403
UniProt:
R4U4A9
LinkDB
All DBs
Position
complement(905445..907595)
Genome browser
AA seq
716 aa
AA seq
DB search
MYDKINKNIKKGDTMAKQIFKKIINNKEITVEHGQLAKQASGSILIRLGKTVILATATTN
PTPTELDFFPLTVVFQEKLYSVGKIPGGFLKREGKPSEYGILSARVIDRALRPLFSENFR
NEVQIVINVLAVDNDHDVRIASLFGASLALGISKIPFNGPVASALVTIDEKNQIIVMPTL
EQLNNGRMELIVAGTENEINMVEAGCQQSSEEEVLQAIMVGHQFIKELNAFQSEIISAVG
ESKMVVELFTIREEISNFVQQHYADQLIKAAQIREKIERYQTISEIEKQAIVKFPWSEEK
DEKLKRRMLLELSTCLKNVVRDEIRHQITVQKLRLDNRQLDEIRPLDSEIDLLPIVHGSA
LFTRGETQVLSIVTLGALGENQIIDGITDEEGKRFMHHYNFPPFSVGETGRMGAPSRREI
GHGALGEKALLQILPSEKEFPYTIRIVSEVLESNGSTSQAAICASTLALMAAGVPIKTPV
VGIAMGLVKNDENYTILTDIQGMEDHLGDMDFKVAGTKDGICALQMDIKISGITQEILWE
ALLAAKKARTTLLANILATIPAPRIELAPTAPKMKTFMIPVEKIRDVIGTGGKTITSIIE
KSNNVKIDIEDDGQVTIYHKDYEAINRAYQLIKDIVFPVEINQELIGTVVKIEKFGAFVN
LKENLDGLIHISKLADHRVEKTEDIVNVNDQVKVKVIELDSKGKIKLKLLEVIKSK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtatgataaaattaacaagaatataaagaaaggcgatactatggcaaagcaaatattt
aaaaaaataattaataataaggaaattaccgttgaacatggccagttagcaaaacaagca
agtggttcaattttaattcgtttaggtaaaactgttattttggcaactgctacaacaaat
ccaactccaacagaattagattttttccccttaacagttgtatttcaagaaaagttatat
tcagttggaaaaatcccaggtgggtttttaaaacgcgaaggaaaaccttccgaatatgga
attttatcagcacgagtaattgatcgggcattacgaccattattttccgaaaacttccgt
aatgaggtgcaaattgtcattaatgtcttagctgttgataatgatcatgatgttcgaatt
gccagtttatttggggcttcattagctttaggaatatcaaaaattcccttcaatggcccc
gtagctagcgccttagtaacaattgatgaaaaaaatcaaatcattgtgatgccaacatta
gaacaattaaataatgggcgtatggaattgattgttgctggaaccgaaaatgaaattaat
atggttgaagctggttgccaacaatcatccgaagaagaagtcttgcaggcaataatggtg
ggtcatcagtttattaaagaattaaatgctttccaatctgaaattattagcgccgttggt
gaatctaaaatggtagttgaattatttacaattcgagaggaaatcagcaattttgtgcag
caacattatgctgatcaattaattaaagctgcccaaattcgtgaaaaaattgaacgctat
cagacaattagcgaaattgaaaaacaagcaattgtcaaatttccttggtcagaagaaaag
gatgaaaaattaaaacgccgaatgttgttagaattatcaacgtgtttaaaaaatgttgtt
cgcgatgaaattcgtcatcaaattactgttcaaaaattacgcttagataatcgtcagcta
gatgaaattcgaccgttagatagtgaaattgatttattaccaattgtgcatggtagtgct
ttatttacaagaggagagacacaagttctatctattgttactttaggggcattaggggaa
aaccaaattattgatggcattactgatgaagaaggtaaacgttttatgcatcattataat
tttccgcctttttcagttggagaaactgggcgaatgggagcaccatcacgtcgtgaaatt
ggtcatggggctcttggcgaaaaggcgttattacaaatcctaccaagcgaaaaagagttc
ccttatacaattcgaattgtttcagaagtattagaatcaaatggatcaacttcgcaagcc
gcaatttgtgcttcaacattagcattaatggcagcaggggtcccaattaaaaccccagtt
gttggaatagctatgggtcttgttaaaaatgatgaaaattacactattttaacagatatt
caaggaatggaagatcacttaggagatatggactttaaagttgctggtacaaaagatgga
atttgtgctttacaaatggatattaagatcagtggaattacacaagaaattttatgagaa
gctttattagcggcaaaaaaagctcgcacaacattattagcaaacatcttagcaacaatt
ccggcaccgcgaatagaattagccccaacagctccaaaaatgaaaacatttatgattcca
gttgaaaagattcgggatgtaattgggacagggggaaaaaccattaccagcattattgaa
aaatcaaataatgttaaaattgatattgaagatgatggtcaagtgacaatttatcataaa
gactatgaggcaataaatagggcttatcaattaattaaagatatagttttccctgttgaa
ataaatcaagaattaattggaacagttgttaaaattgaaaaatttggggcatttgttaat
ttaaaagaaaatctagatgggttaattcatatttccaaactagctgatcatcgcgttgaa
aaaaccgaagatattgttaatgtcaatgaccaagttaaagttaaagtaattgaacttgat
agtaaaggaaaaatcaaacttaaattattagaagtaataaaaagcaaatag
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