Spiroplasma chrysopicola: SCHRY_v1c09380
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Entry
SCHRY_v1c09380 CDS
T02676
Symbol
topA3
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scr
Spiroplasma chrysopicola
Brite
KEGG Orthology (KO) [BR:
scr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scr03032
]
SCHRY_v1c09380 (topA3)
03400 DNA repair and recombination proteins [BR:
scr03400
]
SCHRY_v1c09380 (topA3)
Enzymes [BR:
scr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SCHRY_v1c09380 (topA3)
DNA replication proteins [BR:
scr03032
]
Prokaryotic type
DNA Topoisomerases
SCHRY_v1c09380 (topA3)
DNA repair and recombination proteins [BR:
scr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCHRY_v1c09380 (topA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-GeneID:
16151841
NCBI-ProteinID:
AGM25510
UniProt:
R4UH55
LinkDB
All DBs
Position
complement(1017903..1019693)
Genome browser
AA seq
596 aa
AA seq
DB search
MKYLVVLESPNKISKVKSYLEKVFPQHSFLVKASMGHITELVIKNEKYPLGIELDTMTPI
FNVVENKKDTIKQLISFANEVDKVILATDPDREGEAIAWHLQEQLKCQNKTIRLTFNEIT
EKAIENAFSNPGQLDYQLVNAQQSRQMIDRIMGFKLSNLLQKAENLKSAGRVQSVALKLI
VDTELERKEHNKLEYWTIKQEYKDKNEIELYLDQDGKEIVKDKVLNSQEKAEQVLSKITN
NLVVKEIIETEFNKNIYNAYTTSGILQDANIDLNYSSEKTTNLLQHLFENGYITYPRTDS
TRLNDDFVVAVHKFIATNYGQEYVGQYKLGKNKDNVQDAHEAIRPTNINLTLDKAKKEIS
NHDEFKLYELIYNNTLYALMANETGVKYKVLFSNNGYTFKLNFKKYHFTSYYDLQEIVLD
NFNYHFKVGEMITLESKWLAEQNFTKPSSRYTEHSLIKKLEIKGVGRPSTYATIMKTLIN
REYIKFDKKSIYPTDDGIKAHNLLQKYFSNIINEKYTADMEKVLDRIADGEINHIEFLKL
FYNNFILDFNNATNMIFKDSVKCTKCDVGYIIQRKNYKGNYFKTCNNFPACKNIVS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatatttagtagtgttagaatcacctaacaaaatatccaaagtaaaatcttatcta
gaaaaagtatttcctcagcatagttttcttgtaaaggcctcaatgggtcatattacagaa
ttagtgataaaaaatgaaaagtatccattgggaatagaattagatactatgactccaata
tttaatgttgtggaaaacaaaaaagatactataaaacaattaattagtttcgccaatgaa
gttgataaagttattttagcaactgaccccgatcgagaaggagaagctatagcatggcat
ttacaagagcaattaaaatgtcaaaataaaacaattagattaacttttaatgaaattaca
gaaaaagcaattgaaaatgcttttagtaatccagggcaattagattatcaattagttaat
gctcaacaatcacgacaaatgattgaccgtattatggggtttaaattatctaatttatta
caaaaagcagaaaatttaaaatctgctgggagagttcaatcagtagctttaaagttaatt
gtagatactgagttagaaagaaaagaacacaataagttagagtactgaactattaaacaa
gaatataaagataaaaacgaaattgaattatatttagatcaagatggtaaagaaattgtg
aaagataaagttcttaattcacaagaaaaagcagaacaagttttatctaaaattactaat
aatctagttgtaaaggaaatcattgaaaccgaattcaacaaaaatatttataacgcatat
acaacatcaggtattttacaagatgcaaatatagatctaaattattctagtgaaaaaaca
acaaatctattgcaacatttattcgaaaatggatatattacctatccacgaacagactct
acaagacttaatgatgattttgtagtagcagtacataaatttattgcgacaaattatggc
caagaatatgttggtcaatataaactcggtaagaataaagataatgtgcaagatgctcat
gaagcaattcggccaacaaatattaatttaacactagataaagctaaaaaagaaattagt
aatcatgatgagtttaaattatatgaattaatttataataataccttatatgctttaatg
gcaaatgaaactggtgttaaatataaagtattattttctaataacggatatacttttaaa
ttaaattttaaaaaatatcactttactagttattatgatttacaagaaattgttttagat
aattttaattatcattttaaagttggagaaatgataactttagaatcaaaatgattagct
gaacaaaattttacaaaacctagttcaagatatacagaacattctttaattaaaaaactt
gaaattaaaggtgtcggaagaccttcaacatatgccacaattatgaaaaccttaattaat
cgtgaatatattaaatttgataagaaaagtatttatcctactgatgatggtattaaagct
cataatttattgcaaaaatatttttcaaatattattaatgaaaagtatacggctgatatg
gaaaaagttttggacagaattgcagatggagaaattaatcatattgaatttctaaaatta
ttttataataactttattttagattttaataatgcaactaacatgatatttaaagattca
gttaaatgtactaaatgcgatgttggttatattattcagcgcaaaaattacaaaggtaat
tatttcaaaacatgtaataactttccggcttgcaaaaatatcgtaagttaa
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