Stanieria cyanosphaera: Sta7437_0344
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Entry
Sta7437_0344 CDS
T02406
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
scs
Stanieria cyanosphaera
Brite
KEGG Orthology (KO) [BR:
scs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sta7437_0344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scs03021
]
Sta7437_0344
Transcription machinery [BR:
scs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sta7437_0344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
RNAseD_HRDC_C
Phage_lambda_P
Tipalpha
Motif
Other DBs
NCBI-ProteinID:
AFZ33956
UniProt:
K9XPH8
LinkDB
All DBs
Position
384165..385271
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AA seq
368 aa
AA seq
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MNVTKLTEYEFNTDTSLDTSQLDADFKQVEVEFSSEPEEFGESPTSSYRKSYIDDNIGAF
FKEMARYPLLKPEEEVELANCVKVMVQAEEIRQQLKEQLNRQPTKEEWTKALQLESIRQL
ENRLYRGRVAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQEGAIGLNRATEKFDPNKGY
KFSTYAYWWIRQAITRTIANDARTIRLPIHIVEKLNKLKKAQRNLKQQLQRNPNEQELAN
ELNVSLSQLHQLLELRRQSLSLNHRVGKAEDTELVDLLEDSELQLPEERMSEAMMRQEIF
TVLSDVLTEREKDVISLRYGLATNQPYTLEEVGGMFNLSRERVRQIQSKAMRKLRRPQVA
RRLKGWLN
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaacaaaattaacagaatacgagtttaatactgatactagcctagatactagt
caattagatgcagattttaaacaagttgaagtcgaattttctagtgaaccagaggaattt
ggagaaagtccaacttctagttatcgcaaaagttatatagatgataatattggcgcgttc
tttaaagaaatggctcgttatccactgcttaaacccgaagaagaagtagagttagccaat
tgcgttaaagtgatggtacaagcagaagaaatacgacaacaattaaaagaacaattaaac
agacaaccaactaaagaagagtggacaaaggcacttcaattagaatctatccgtcaatta
gaaaatcgattatatcgtggtcgagttgctaaaagaaaaatgattcgctctaatctaagg
ttagtagtttcgatcgcaaaaagatatttaaatcggggagttccttttttagatttaatt
caagaaggagcgattggattaaacagagctacagaaaaatttgatccaaataaaggttat
aaattttctacttatgcttattggtggattcgtcaagcaattacgagaacaattgccaat
gatgcgcgcacaattcgtttaccaattcatattgttgaaaagctcaacaaacttaaaaaa
gctcaacgtaatctcaaacagcaattgcaaagaaatccaaatgaacaagaattagctaac
gaattaaatgtttctttatctcaattgcatcagttgttagaattacgccgtcaatcttta
tctctaaatcatcgggtaggtaaagcagaagatacagagttagtagatttacttgaagat
agtgaattgcaactaccagaagagcgtatgagtgaggcgatgatgcgtcaagaaattttt
actgtcttgagtgatgttttgacagaaagagaaaaagatgtaatttctttacgttatgga
ttggcaactaatcaaccctatactttagaagaagtagggggaatgtttaatctctcgcgg
gaacgagttcgtcagattcaaagtaaagcaatgcgaaaattgcgtcgtccccaagtagct
cgtcgtttgaaaggatggttaaattaa
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