Stanieria cyanosphaera: Sta7437_1402
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Entry
Sta7437_1402 CDS
T02406
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scs
Stanieria cyanosphaera
Pathway
scs03420
Nucleotide excision repair
scs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sta7437_1402
03430 Mismatch repair
Sta7437_1402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scs03400
]
Sta7437_1402
Enzymes [BR:
scs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sta7437_1402
DNA repair and recombination proteins [BR:
scs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sta7437_1402
MMR (mismatch excision repair)
Other MMR factors
Sta7437_1402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
DEAD
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AFZ34969
UniProt:
K9XSA9
LinkDB
All DBs
Position
1553303..1555654
Genome browser
AA seq
783 aa
AA seq
DB search
MSLDSDRLASTVANLPSTDLEHSAWLKLKLQQLRNSLRPGQENLANWNGGLMAVSAVPGA
GKSHSLAVAAAIAIAKHQLHSRKQLVIVTYTRSAAASIKTKIRNLLKELYLPPGGFIVQT
LHGLALNIANSQRELSGLNLDRVTIVVPTVGHRVIKGAVDKWIAENPRRYAMLIEGIQFD
GEETERLRRQSVLRTEILPNLAYTVVREAKSSGLLPEDLQKFSQLTTDEYGILEIAAGLY
QQYQQLMRSRNLIDYDDMILAALRVLKYEPMRQLWQNQVFAVFEDEAQDSSPLQAQLISI
LAENDLDPDLPANLVRVGDPNQAINSTFTPADPIYFNWFCRHCEQQGNFATMNQAGRSSE
IIIKAANFALQWMNRQENKQNNLDLPFRLQNIATVSQNDPQPEANPEPEGKGLEIYQPDD
IYHTVTLIGERVKKLLEGNQERNAAILVRENRQGRFLAEQLAYLQREHQIRVYEVGEVDR
HCQIPEEILKLLQFIYRPHSPDNLKAALEVIEQRGLIATQDLNALATFPEQFLYPTPLQP
QAKPHIEQVRRYCCNILRARIELPHYQLIPFLGMTLKYTGSELATVQKLSERVNQQITGH
SSLPNTIRALEEIVSSEKFEAVEEDHDDQYTRSGQLTIITMHKAKGLDWDYVFIPFLHED
ILPGQPWIPTSGRFLGNYTLAEVARAQIRAIVHNQYQGEIESLLIPQPLEAWREAGKLKQ
AEEFRLLYVAMTRAKRLLWMSAAAIGPFRWNTFRGDKPTNLQTKKPCPILPTLARQFPES
VMK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtcattggattcggatcgtcttgcttctactgttgctaatttaccctcaactgattta
gaacactctgcttggctaaaattaaaattacagcaactacgaaacagtttacgcccagga
caagaaaatctagctaattggaatggtgggttaatggctgtttctgccgtacctggtgca
ggaaagtctcatagtttagccgtagcagcagcgatcgcaatagctaaacatcaactacat
agtcgtaagcaattagttattgtaacttatactcgttcagcagcagctagtatcaaaacg
aagatccgtaatcttttaaaagagttgtatctaccgcctggtggttttatagttcagact
cttcacggtttagctttaaatattgctaattctcaacgagagttatcaggactaaacttg
gatcgagttaccattgttgtacctacggttggtcatcgagtaattaagggtgcagtagat
aaatggattgccgaaaatcctcgtcgttacgcaatgctgatcgaaggaattcagtttgat
ggcgaagaaacggaaagattacgccgacaatctgtattaagaactgaaattttgcctaat
ttagcttatacagttgtaagagaagccaaaagttctggtttattaccagaagacttacaa
aaatttagccaacttactacagatgaatacggtattttagagattgcagcaggattgtat
caacaataccaacaactaatgcgatcgcgtaatttaattgattacgatgacatgattctg
gctgctttacgggtattgaagtatgaaccaatgcgtcaattgtggcaaaatcaagttttt
gcggtgtttgaagatgaagcgcaagattctagccctctgcaagctcaattaatctcaatt
ttggctgaaaatgatcttgatcccgatttacctgctaatttagtacgagtgggcgatcct
aaccaagcaattaattctacttttactcccgcagatccgatttatttcaattggttttgt
cgtcattgtgaacaacaaggcaactttgccactatgaatcaggcgggaagaagtagtgag
attattattaaagcagctaatttcgcgttgcagtggatgaatcggcaggagaacaagcaa
aataatttagatttgccttttcgtttacaaaatatcgctactgtatctcaaaatgatcct
caaccagaagctaatcccgaacctgaaggaaaagggttagaaatttatcaacccgatgat
atttatcatactgttaccttgattggggaacgagtcaaaaaattactagaaggaaatcaa
gaaagaaacgctgctattttagttagggaaaatcgtcaaggacgtttcctcgccgaacaa
ctcgcttatttacaaagagaacaccaaattagagtttatgaagtaggggaagtagataga
cattgccaaattcccgaagaaattctcaaacttttacaatttatttatcgtccccattca
ccagataacctcaaagcagctttagaagtaatcgaacaaagaggtttaattgctactcaa
gacttaaacgccttagcaacctttcccgaacaatttctctatccgactcctctgcaaccc
caagctaaacctcacatcgaacaagtccgtcgttactgctgcaatatcttacgcgcccgt
attgaattacctcattatcaattaattccttttttagggatgactttaaaatatactggt
tcagaattagctacagtacaaaaattatccgaacgagtcaatcaacaaattactggacat
agttccctgccgaatactattcgcgctttggaagaaatagttagttccgaaaaatttgaa
gcagttgaagaagatcacgacgaccaatatactcgttcaggacaacttactattattact
atgcacaaagccaaaggtttagattgggattatgtctttattccttttttacacgaagat
attttgcctggtcaaccttggattccaacttcaggtagatttctcggtaactatacctta
gcagaagttgctcgcgctcaaataagagcgatcgttcacaaccaatatcaaggagaaatt
gaatcacttttgattcctcaacccctagaagcttggcgagaagcaggaaaattgaaacaa
gctgaagaatttcgtttgttgtacgtcgccatgactagggcaaaacgtttactatggatg
tccgcagcagcaattggcccttttcgttggaatacttttcgcggagataaaccaaccaat
ttacaaactaaaaaaccctgtcctattttacctactttagcgcgtcagtttcctgaatca
gttatgaagtaa
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