Stanieria cyanosphaera: Sta7437_1968
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Entry
Sta7437_1968 CDS
T02406
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scs
Stanieria cyanosphaera
Pathway
scs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sta7437_1968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scs03019
]
Sta7437_1968
03016 Transfer RNA biogenesis [BR:
scs03016
]
Sta7437_1968
Enzymes [BR:
scs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Sta7437_1968
Messenger RNA biogenesis [BR:
scs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Sta7437_1968
Transfer RNA biogenesis [BR:
scs03016
]
Prokaryotic type
tRNA degradation factors
Sta7437_1968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AFZ35522
UniProt:
K9XV32
LinkDB
All DBs
Position
complement(2208951..2211107)
Genome browser
AA seq
718 aa
AA seq
DB search
MEEFDQSISFDGRDIRLKVGLLAPQAGGSVLIQSGDTAVLVTATRAEGREGIDFLPLIVD
YEERLYAAGRIPGGFLRREGKPPERAILTSRLIDRPLRPLFPGWLRDDIQIVATTLSMDH
EVPPDILAVTGASVAVLLAQIPFYGPMAAVRVGLVGDDFIINPTYQEIEQGDLDLVVAGS
PDGVVMVEAGANQLPEQDIIEAIDFGYEAVQELIQAQRQLIQQLGIEMPTIEPPVVDETL
TNFISDRASEAIKQVLSQYDFDKNARDAALDEIKKTKIEAVIAELPEEEPIKIATSENPK
AIANEFKAVTKKLMRAQIIEQGVRVDGRTLDQVRPISCRVGLLPQRVHGSGLFRRGLTQV
LSIATLGTSGDAQDLADDLHPEDEKRYLHHYNFPPFSVGETKPMRSPGRREIGHGALAER
AIVPVLPPQEEFPYVVRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPITKPVSGAAMGLI
KENDEVRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKITGLSMDVVAKAIQQAKPA
RMHILEEMLKAITQPRSELSPYAPRLLTIKIDPELIGLVIGPAGKTIKGITEQTGAKIDI
EDDGTVVIAAVEAEKAERARSIISGMTRKLNEGDVYVGKVTRIIDIGAFVEILPGKEGMI
HISQLAEGRVGKVEDEVAVGDEIVVKVRGFDNKGRLNLTRLGIHPEEAAAARATVAVK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattcgatcagtcgatatctttcgatggaagagatattagacttaaagtaggc
ttgctcgcgccacaagcaggcggttctgttttaattcaatcaggagatacagcagtatta
gttacggcgacgagagcagaaggaagagaagggattgattttttacctctgatcgttgat
tacgaagaaaggttgtatgcagccggtcgtattcccggtggatttttaagaagagaagga
aaacctccagaaagagcgattctgacgagtagattaattgatcgccctttacgtcctctt
tttcctggttggttgcgagatgatattcaaatcgttgctactactctatcgatggatcac
gaagtacctcctgatattttggcagtaacaggtgcttcggtggctgttttattggcgcag
atacctttttatggtccaatggcagccgtgagagttggtttagtgggtgatgattttatt
atcaatcctacttatcaagaaattgaacagggagatttagatttagttgtagctggtagt
cccgacggtgtagtgatggttgaagccggggcaaatcaattaccagaacaagatattatt
gaagcgattgatttcggttacgaagcggtacaagaattaattcaagctcaaagacaatta
attcaacagttgggtattgaaatgcccacgattgaaccacctgtcgtagatgaaaccttg
acgaattttattagcgatcgcgcatccgaagccatcaaacaagtcctctctcaatacgat
ttcgataaaaatgctcgtgacgcagctttagatgagatcaaaaaaactaaaattgaagca
gtaatcgctgaactgccagaagaagagccgatcaaaattgcgactagtgaaaatcctaag
gcgatcgcgaatgaatttaaggcagtcacgaaaaaattgatgcgggcgcaaattatcgaa
caaggtgttcgagttgacggacgtacattagaccaagttagacccatttcttgtcgagta
ggactactaccccaacgtgttcacggtagcggtttgtttagaagaggattaactcaggtt
ttgtcaattgctacgttgggaacttcaggtgatgctcaagatttagctgatgatcttcat
cccgaagacgaaaaacgctatctgcatcattacaactttccacctttttctgtcggggaa
acgaagccaatgcgttctcctggacgtagagaaattggtcacggtgctttagcagaacgt
gctattgtaccagttttaccaccccaagaagaatttccttatgtagttagagttgtctcg
gaagtcttatcttccaacggttcgacttcgatgggttcggtttgtggttctactctggct
ttaatggatgcaggagtaccaattactaaacccgttagtggtgcagcaatgggcttaatc
aaagaaaacgacgaagttagaattctcaccgatattcaagggattgaagatttcttagga
gatatggactttaaagttgcaggtacagatacaggcattactgcgctgcaaatggatatg
aaaattacaggcttatcaatggatgtagtagctaaagctatccaacaagccaaacctgcc
agaatgcatatcctggaagaaatgcttaaagcgatcacccaacctcgttcagagttgtct
ccttatgcaccgaggttgctgactattaaaatcgatcctgaattaattggtttagtgatc
ggtcctgcgggtaaaacaattaaaggaattaccgaacaaacaggagcaaaaattgacatc
gaagatgacggaacagtggttattgcagccgttgaagccgaaaaagctgaacgagccaga
agtattatctctggtatgactcgtaaattaaatgaaggggatgtctatgttggcaaagtt
acccgaatcattgacattggagcttttgtagaaatcttacctggtaaagaagggatgatt
catatttctcaattagctgaaggtagagtaggcaaagttgaagatgaagttgctgtggga
gatgaaatcgtagttaaagttagaggctttgataataaaggtcgtcttaatttgactcga
ttgggtattcatcccgaagaagcagcagcagcaagagcaacagttgctgttaaataa
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