Stanieria cyanosphaera: Sta7437_2390
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Entry
Sta7437_2390 CDS
T02406
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scs
Stanieria cyanosphaera
Pathway
scs03420
Nucleotide excision repair
scs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sta7437_2390
03430 Mismatch repair
Sta7437_2390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scs03400
]
Sta7437_2390
Enzymes [BR:
scs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sta7437_2390
DNA repair and recombination proteins [BR:
scs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sta7437_2390
MMR (mismatch excision repair)
Other MMR factors
Sta7437_2390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
Viral_helicase1
DUF1978
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFZ35929
UniProt:
K9XV39
LinkDB
All DBs
Position
complement(2698599..2700914)
Genome browser
AA seq
771 aa
AA seq
DB search
MTANTDFFSHLNPSQRRAVEHFCGPMLVVAGAGSGKTRALTYRIANLIRNHKVEPEHILA
VTFTNKAAREMKERIEYLFVQELAQDKYGQRLEFLNEYDQKKLKSQVYKRITKPLWIGTF
HSLFARLLRFDINKYQDERGRTWKRNFSIFDESDVQSLIKNIVTKQLNLDDKKFNHRTVR
YAISNAKNQGLTPEQYARENGGYKGRVIAEVYNEYQAQLAANNALDFDDLILVPVRLFQQ
NESILGYWHTQFHHILVDEYQDTNRTQYDLIRLLATNDETKKQEWDWRGRSLFVVGDADQ
SIYSFRLADFTILLDFQQDFGDGLPDDDTRTMIKLEENYRSRENILQAANALIENNSQRI
DKVLKATRGIGEQIYVYKADDEQHEAKFVINQLKRMVTENPELTWGSFSILYRTNAQSRP
FEDLLLQNNIPYNIVGGLKFYDRKEVKDAIAYLRMIVNPNDTVSLLRIINTPRRGIGKTS
IESLNNAAQQLGVPLWEILSDETSVNTMAGRSAKSVNKFAQMILHLQQQQENLTAAETLN
YIMEASGYVDDLKKQGTDEADNRIANVVELYNAIVQFQEDNEENKLQDFLANASLASDLD
NLEEGQEKVSLMTLHSAKGLEFPVVFLVGMEQGLFPHNRTLNDPLELEEERRLCYVGITR
AQEQLFLTHARERRLWGERELAVASQFLKELPQDLVSSNLKSNYRAKTANTTIQTNNYNW
NIGDRVWHQDFGEGEITHILGSGKKATLAIRFPSLGTTKIIPQLTPMEKIN
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaatactgacttttttagccatctcaatccttctcaacgtcgcgctgtcgaa
catttttgtggccctatgttagtggttgctggtgctggatctggtaaaactagggcatta
acatatcgaattgctaacctaattcgcaaccataaagttgaaccagaacatattttggca
gtgacttttactaataaagctgcgcgagaaatgaaggaaagaattgaatatctttttgtg
caggaattggcgcaggataaatatggacaaaggttagaatttttaaatgaatacgaccaa
aaaaaactgaagtcgcaagtttataaaaggattactaaacctctatggattggaactttt
catagtttatttgctcggttacttcgtttcgatattaataagtatcaggacgaaagagga
agaacttggaagcgaaatttttcgatttttgatgagtctgatgttcaaagtttaatcaaa
aatattgtcaccaaacagttaaatctagatgataaaaagtttaatcatcgcacagtcaga
tatgcgattagtaatgctaaaaaccaaggtttaactcctgaacaatatgctagagaaaat
gggggttataaaggtagagtaattgctgaagtttataacgaatatcaagcacaactagca
gctaataatgctttagattttgatgatttaattttagttccagtcagattgtttcaacaa
aatgaatcaattttgggttattggcacactcagtttcatcatattttggtagatgaatat
caggatactaaccgcactcaatacgatctaattcggttacttgctactaatgatgaaacg
aaaaaacaggaatgggattggcgaggtagatcgttatttgtggtaggagatgcggatcaa
tcgatctattcttttcggttagcagattttacgatcttactggattttcaacaagatttt
ggcgatggtttacccgatgatgatacaagaacgatgattaaattggaagaaaattatcgt
tctcgggaaaatattttacaagctgctaatgctttaattgaaaacaatagccaacgaatt
gataaagttttaaaagccaccagaggaattggcgaacaaatttatgtttataaagcagat
gatgagcaacatgaagctaaatttgttatcaatcaacttaaacgaatggtaacagaaaac
cccgaattaacttggggaagtttttcaattttataccgaactaatgctcagtctcgtccc
tttgaggatttattattacaaaataatattccttataatattgtcggtggtttgaagttt
tatgaccgtaaggaagttaaagatgcgatcgcgtatctgcggatgattgttaatcctaat
gatacggttagtttactgagaattattaacactcctagaaggggaattggtaaaactagt
attgaatctctcaataatgcagcacaacaattaggtgttcctctttgggaaattcttagt
gatgaaacttctgttaatacaatggcaggtagatcggcaaaatcagttaataaatttgct
caaatgattttacacctgcaacaacaacaagaaaacttaacggctgctgaaactttaaac
tatattatggaagcatctggttatgttgatgacttgaaaaaacaaggcaccgatgaagca
gataatcgcattgctaacgtagtggaattatataatgcgatcgttcaatttcaagaagat
aatgaagaaaataaactccaagatttccttgctaatgcttcccttgcttccgatttagat
aatcttgaagaagggcaagaaaaagtctcgttaatgacacttcattctgccaaaggttta
gaatttcctgtcgtttttctagtcggaatggaacaaggtttatttcctcacaatcggact
ttaaacgatcctttagaattagaagaagaacgtcgtctttgttatgttggtatcactcgc
gcccaagaacaattatttttaactcatgctagagaacgtcgtctttggggtgaaagagaa
cttgctgttgcttcacaatttctcaaagaacttcctcaagatttagttagtagtaatctt
aaatctaattaccgtgctaaaactgcaaatactacaattcaaactaataattataattgg
aatataggcgatcgcgtttggcatcaagactttggtgaaggagaaattactcatatttta
ggttcaggaaaaaaagccactttagctattagatttcctagtttaggtacaaccaaaatt
attccccaactcactccaatggaaaaaataaattag
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