Stanieria cyanosphaera: Sta7437_2941
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Entry
Sta7437_2941 CDS
T02406
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
scs
Stanieria cyanosphaera
Brite
KEGG Orthology (KO) [BR:
scs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sta7437_2941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scs03021
]
Sta7437_2941
Transcription machinery [BR:
scs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sta7437_2941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_28
HTH_23
KORA
UPF0122
Prismane
HNH_repeat
HTH_Tnp_4
CARD
Motif
Other DBs
NCBI-ProteinID:
AFZ36460
UniProt:
K9XV35
LinkDB
All DBs
Position
complement(3350525..3351400)
Genome browser
AA seq
291 aa
AA seq
DB search
MSNNIEIYLKQIGRIPLLSATQEVDLANQVQLMLPLLEKKHLTPEEQEIVRKGQWAKQQM
TQANLRLVVSIAKKYQNRGLSLLDLIQEGSLGLIRAIEKFDPDKGYKFSTYAYWWIRQAV
TRAIANQSRAIRLPIHIIQDLNKIKKITRQLSQELGRQPTEREIAREMKLSLKKLRIIKA
AAQKTKLKSLNVKIDENQTELAQILATDSPSPTEIVTETERSNQIASLLETLSPKQQNVI
ALRYGLDDGIPKTYEEIGTRCGISRERVRQIIHRAMKLLKKRAMQLEVSFG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataacatcgaaatttatctcaaacaaattggcagaattcctcttctcagtgct
actcaagaagttgatttagctaatcaagtacaattaatgttacctttgttggaaaaaaaa
caccttacaccagaggaacaagagattgtcagaaaaggacaatgggctaaacaacaaatg
actcaagctaatttgcggttagtagtctccattgccaaaaaatatcagaatcgtggtttg
tctttactcgatctgattcaagaaggaagtttaggtttgattcgagcgattgaaaaattt
gatcctgataaaggttataaattttcaacttatgcctattggtggattcgtcaagctgtt
actcgtgcgatcgcaaatcaatctagagccattcgtttaccaattcatattattcaagac
cttaataagattaaaaaaataactcgtcaattatctcaagaattaggtagacaacctact
gaacgagaaatagctagagagatgaaattaagtctcaaaaaacttagaatcattaaagca
gcagcccaaaaaaccaaattaaaaagccttaatgtcaaaatagatgagaaccaaaccgag
cttgctcaaattttagccactgattctccttctcctaccgaaattgtgactgaaaccgaa
agaagcaaccagattgccagtctactcgaaactctttctcctaaacaacaaaatgtgatt
gctttgcgttatggtcttgatgatggtattcccaaaacctacgaagaaatagggactcgt
tgtggtatcagtcgggaacgagttagacaaattattcatagagcaatgaaactgctcaaa
aaacgtgctatgcagcttgaagtctcttttggatag
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