Stanieria cyanosphaera: Sta7437_4064
Help
Entry
Sta7437_4064 CDS
T02406
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
scs
Stanieria cyanosphaera
Brite
KEGG Orthology (KO) [BR:
scs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scs03400
]
Sta7437_4064
DNA repair and recombination proteins [BR:
scs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sta7437_4064
Archaeal homologous recombinant proteins
Sta7437_4064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_29
AAA_21
Phage_GP20
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AFZ37541
UniProt:
K9XZI8
LinkDB
All DBs
Position
4554430..4557453
Genome browser
AA seq
1007 aa
AA seq
DB search
MIPLQLTLKNFLSYREATLDFRGLHTACICGANGAGKSSLLEAITWVIWGKTRTATEDDV
IHAGVNHVRVDFDFICHQQTYRIIRSRSRGKSSALEFQVVTESGRFRSITAKGMKATQEE
ITTALKLDYDTFINSAYLRQGRADEFMLRRPSDRKQILADLLKLDRYEQLAVQSKDLAKE
YKGQAEQLRQSIVLLEEQLAQEKFTQQELISLETQINQLQQLQEQNSTRLQDLQVIEHQR
QAWEQQITVQETQYQNLLQDCDRLSKDLNFLQIQLQQLEQLIAQEPEIVQQYNQLLSWQE
QEKDFLAKFATYQQVQKQLTQLEQQLNQQNNELNLQIRQVETRLEAVEQQEQEIEQVLAR
SSEVEAGLEQLNLHRQRLVELDRIQQYVAPLLQQKNNLQLEIEKTETKLNVKLEQIQQAS
EQLAEQIAKVPQMRQAVLTIDAQIDELDKKKVYQKRVREKGEERRDFQTTLQANQRVYER
QFQELQQKLDLLGIPEAVCPLCERELDEHHRSHVIDKTQKQQKEIQEQIWVIREQLAACE
RELQLLRKEYKQLDHELTTYDSLQLQIGQLEAQLEATGEIHKQLKNIKAEQEELENLLGT
GNYAQELQLDLTQLNNEIKNFNYDEQTHALVRGEVERWRWAEIKQVKIEDAKKRQANLES
QKPQLLEQIQSLQQEIKQLHTTSEIQQQIEQVQQTIAQLGYDQTQHQNLLTQLRQAQTWY
VRYQELTQAKQQYPQLQIRLQELQQLLELRLQDKTVSQTQIDNYITQREQINDYRQEIKT
LEQQIHQRRQQLDELIIQTGRLQQTLVQIKELKNQYTTNCQQLKEIDKNYRIYQELGQAF
GKNGIQALMIENILPQLEAETNHILARLTGNQFHVQFLTQKAGKSSSKKTTKLIDTLDIL
IADARGTRPYETYSGGEAFRINFSIRLALAKLLAQRAGTSLQLLIVDEGFGTQDSEGCER
LVAAINAIASDFACILTVTHMPQFKEAFQTRIEVYKSDRGSLLRLSN
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgattcctttacaactaacgctgaaaaactttctaagttatcgtgaagcaactttagat
tttcgaggattacatactgcttgtatttgtggggcgaatggggcaggaaaatcttcttta
ctcgaagcaattacttgggtaatttggggaaaaactcgtacagcaacagaagatgatgtg
attcatgcaggagtaaatcatgtgcgagttgattttgatttcatttgtcatcaacaaact
tatcgcattatccgcagtagatctcggggaaaaagtagtgcgttggaatttcaggtggta
actgagtcgggcaggtttcgttcgattactgctaagggaatgaaagcaactcaagaggaa
attactactgctttaaagttagattatgatacgtttattaattctgcctatttaagacag
ggaagggcagatgaatttatgttgcgtcgtccaagcgatcgcaaacaaattttagcagat
ttattaaaattagatcgttatgaacagttagcagtacagtcaaaagatttggctaaagaa
tataaaggacaagcagaacaactgagacaaagtatagttttattagaagaacaattagcg
caggaaaagtttacacaacaggaattaattagtttagaaactcaaattaatcaactgcaa
caattacaagaacaaaatagtactcgtctacaagatttacaagtaattgaacatcaacgt
caagcctgggaacaacaaattacagttcaagaaacacaataccaaaatctgcttcaagat
tgcgatcgcttatcaaaagatttaaatttcttacaaattcaattacagcaactagaacaa
ttaattgcccaagaaccagaaattgttcagcagtataatcaattattaagttggcaagaa
caagaaaaagattttttagctaaatttgccacttatcaacaggtacaaaagcaattaact
caattagaacaacaattaaatcaacaaaataatgaattaaatttacaaattcgtcaggta
gaaactcgtttagaagcggttgagcaacaagaacaagaaatcgagcaagttttagctcgt
tcctcggaagtagaagcaggtttagaacaactcaatctccatcgtcaaagattagtagaa
ttagaccgaattcaacaatatgtcgctcctttattacaacaaaaaaacaatctgcaactc
gaaattgaaaaaacagaaactaaactcaatgttaaactagagcaaattcaacaagcttct
gaacagttagctgaacaaattgctaaagtaccacaaatgcgtcaggcagtcttaactatc
gacgctcaaattgacgaactagataaaaagaaagtttatcaaaaaagagttagagaaaaa
ggagaagaaagaagagattttcaaacaactttacaagcaaatcaaagagtttatgaaaga
cagtttcaagaattacaacaaaaactagatttattaggtattcccgaagcagtttgtcct
ttatgcgaaagagaattagatgaacatcatcgcagtcatgtaattgataaaactcaaaaa
caacaaaaggaaattcaagaacaaatttgggtaattagagaacagttagctgcttgtgaa
agagaattacaattattaagaaaagaatataaacaattagaccatgaattaacaacttat
gactctctgcaattacaaataggacaattagaagctcaattagaagcaacaggagaaatt
cataaacaacttaaaaatattaaagcagaacaagaagaattagaaaacttattaggaact
ggtaactatgctcaagaattgcaattagatttaactcaactaaataatgaaataaaaaat
tttaattatgatgaacaaactcatgctttagttagaggagaagtagaacgttggcgatgg
gcagaaattaaacaagtaaaaatcgaagatgctaaaaaaagacaagctaatctagaaagc
caaaaaccacaattattagaacaaattcaatctttacaacaagagatcaaacaattacat
accacttcagaaattcaacaacaaattgaacaagtacaacaaacaattgctcaattaggt
tacgatcaaactcaacatcaaaaccttcttactcaacttcgtcaggctcaaacttggtac
gtacgctatcaagaattaactcaagccaaacaacagtatccccaattgcaaattcgtctg
caagaattacaacaattattagaattaagattacaagataaaactgttagtcaaacacaa
attgataattatattactcaacgagaacaaattaacgattatcgccaggaaattaaaact
ttagaacaacaaattcatcaacgtcgtcaacaattagatgaattaattattcaaacagga
agattacaacaaaccttagttcaaattaaagaacttaaaaatcaatatacaactaactgc
caacaactcaaagaaattgacaaaaattatcgaatttatcaagaattaggacaagctttt
ggtaaaaatggcattcaagctttaatgattgaaaatatcttaccgcaactagaagcagaa
actaatcatattttagctcgattaactggaaaccaatttcacgttcaatttttaactcaa
aaagcaggtaaaagtagcagtaaaaaaactactaaactaatcgatactttagatatttta
atcgcagatgctagaggtactcgcccctacgaaacctattctggtggagaagcttttcgg
attaacttttcaattcgtttagccttagcaaaacttctagcacaaagagcaggaacttct
ctacaattactgatagtagacgaaggatttggtactcaagatagtgaaggttgtgaaaga
ttagttgcagccattaatgcgatcgcatcggattttgcctgtatcttaacagttacccat
atgcctcaattcaaagaagcctttcaaaccagaattgaagtttataaaagcgatcgcggt
tctttattacgtctatctaattaa
DBGET
integrated database retrieval system
