Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_2857
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Entry
SCAT_2857 CDS
T01646
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sct03032
]
SCAT_2857 (topA)
03400 DNA repair and recombination proteins [BR:
sct03400
]
SCAT_2857 (topA)
Enzymes [BR:
sct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SCAT_2857 (topA)
DNA replication proteins [BR:
sct03032
]
Prokaryotic type
DNA Topoisomerases
SCAT_2857 (topA)
DNA repair and recombination proteins [BR:
sct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCAT_2857 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
CCB75562
UniProt:
F8JP70
LinkDB
All DBs
Position
complement(2989523..2992402)
Genome browser
AA seq
959 aa
AA seq
DB search
MSPTTETAQGGRRLVIVESPAKAKTIKGYLGPGYTVEASVGHIRDLPNGAAEVPAKYTGE
VRRLGVDVEHDFQPVYVVNADKKTQVKKLKELLAESDELLLATDEDREGEAIAWHLQEVL
KPKVPVRRMVFHEITKDAIQAAVRNPRELNKRLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERMAFSSAEYWDLVGTFGTGRAGDPTDPGTLTARLTSVD
GRRVAQGRDFGPNGRLKEGSAVLHLDESAARALAAALADTRFAVRSVESKPYRRSPYAPF
RTTTLQQEASRKLGMGAKATMQVAQKLYENGFITYMRTDSTTLSETAISAARTQVTQLYG
ADYLPDKPRVYASKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQYHLYELIWMRTVASQM
KDAVGQSVTVKVAGRSADGRDAEFSASGKIITFHGFLKAYVEGADDPNAELDDRERRLPQ
VTEGDPLTAHSLDADGHSTKPPARYTEASLVKELEEREIGRPSTYATIMGTILDRGYVFK
KGTALVPSFLSFAVVGLLEKHFGRLVDYDFTARMEDDLDRIARGEAQAVPWLRRFYFGEA
AEGQAGVAADAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGDGIVLRVGRYGPYVEQA
VTGEDGEETSRRADVPDDLPPDELTVDYARELLAKPTGAIELGTDPATGHTIVAKDGRYG
PYVTEVLPEGTPKTGKNAVKPRTASLLKSMALDTVTLEDALKLMSLPRVVGTDPESGAEI
TAQNGRYGPYLKKGTDSRSLDSEEKIFTVTLEEALAIYAQPKQRGRAAAKPPLKELGTDP
VSERPVVVKDGRFGPYVTDGETNATLRRDDDVETITPERGYELLAEKRAKGPAKKATAKK
APAKKAPAKKATAAKKTTAAKKTAAKKTTAAKKTTAKKATAKKATSAAAGTAVATDDGE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccaccgagaccgcacagggcggccgtcgcctcgtcatcgtcgagtcgccc
gccaaggcgaagacgatcaagggctacctcggccccggttacacggtcgaggcgagcgtc
gggcacatccgcgacctgcccaacggggccgccgaggtgccggccaagtacaccggcgag
gtgcgccgcctcggggtggacgtcgaacacgacttccagcccgtctacgtcgtcaacgcg
gacaagaagacgcaggtcaagaagctcaaggagctgctggccgagtcggacgaactcctg
ctggccaccgatgaggaccgggagggcgaggcgatcgcctggcacctccaggaggtcctc
aagcccaaggtcccggtgcgccggatggtcttccacgagatcaccaaggacgccatccag
gccgccgtgcgcaacccccgcgagctgaacaagcggctggtggacgcccaggagacgcgc
cgcatcctcgaccgcctctacggctacgaggtctccccggtgctgtggaagaaggtcatg
ccgcggctgtcggccggccgggtgcagtcggtggccacccggctggtggtcgagcgcgag
cgggagcggatggcgttctcctccgccgagtactgggacctggtcggcaccttcggcacc
ggccgggccggcgaccccaccgaccccggcaccctcaccgcccggctgacctcggtggac
ggccgccgggtcgcccagggccgcgacttcggccccaacggacggctcaaggagggctcg
gccgtcctgcacctggacgagtcggccgcgcgggcgctggccgcggcgctcgccgacacc
cggttcgcggtgcgctcggtggagtccaagccctaccgccgctcgccgtacgcgccgttc
cgcaccaccaccctccagcaggaggccagccgcaagctgggcatgggcgccaaggccacc
atgcaggtggcgcagaagctgtacgagaacggcttcatcacctacatgcggaccgactcc
accacgctgtcggagaccgcgatctccgccgcccggacccaggtcacccagctctacggc
gccgactacctgcccgacaagccccgcgtgtacgcctccaaggtcaagaacgcccaggag
gcgcacgaggcgatccgcccctccggcgaccgcttccgcacccccgccgagaccggcctg
accggcgaccagtaccacctgtacgagctgatctggatgcgcaccgtcgcctcccagatg
aaggacgcggtcggccagtcggtcaccgtcaaggtggcggggcgctccgccgacggccgg
gacgccgagttctccgcctccggcaagatcatcaccttccacggcttcctcaaggcgtac
gtcgagggcgccgacgaccccaacgccgagctggacgaccgggagcgccggctcccccag
gtgaccgagggcgacccgctgaccgcgcactccctcgacgccgacggtcactccaccaag
cccccggcccgctacaccgaggcgtcgctcgtcaaggagctggaggagcgcgagatcggc
cgcccctccacctacgccacgatcatgggcaccatcctcgaccgcggctacgtgttcaag
aagggcaccgcgctcgtcccctcgttcctctccttcgccgtcgtcggcctgctggagaag
cacttcggccggctggtcgactacgacttcaccgccaggatggaggacgacctcgaccgc
atcgcccgcggtgaggcgcaggcggtgccgtggctgcgccggttctacttcggcgaggcc
gccgagggccaggccggggtcgccgccgacgcgggcaacggcgacggcgaccacctcggc
gggctcaaggaactcgtcaccgacctcggcgccatcgacgcccgcgaggtctcctcgttc
ccggtcggcgacggcatcgtgctgcgcgtcggccgctacggcccctacgtcgagcaggcc
gtcaccggcgaggacggcgaggagaccagccgccgcgccgacgtccccgacgacctgccg
ccggacgagctgaccgtcgactacgccagggaactgctggccaagcccaccggcgccatc
gagctgggcaccgacccggccaccggccacaccatcgtcgccaaggacggccgctacggc
ccgtacgtcaccgaggtgctccccgagggcaccccgaagaccgggaagaacgccgtcaag
ccgcgcaccgcgtcgctgctgaagtcgatggcgctcgacacggtgacgctggaggacgcg
ctcaagctgatgtcgctgccgcgcgtggtgggcaccgaccccgagtcgggcgccgagatc
accgcgcagaacggccgctacgggccgtacctgaagaagggcaccgactcccggtcgctc
gactccgaggagaagatcttcacggtcaccctggaggaggcgctggcgatctacgcccag
cccaagcagcgcggccgggccgccgccaagccgccgctgaaggaactgggcaccgacccg
gtcagcgaacgccccgtggtggtcaaggacggccgcttcggcccgtacgtcaccgacggc
gagaccaacgccacgctgcgccgggacgacgacgtggagaccatcacccccgagcgcggc
tacgagctgctggccgagaagcgcgccaagggcccggcgaagaaggcgaccgccaagaag
gccccggcgaagaaggccccggcgaagaaggcgacggccgccaagaagaccaccgccgcg
aagaagaccgccgccaagaagaccacggcggccaagaagacgacggccaagaaggcgacc
gccaagaaggccacgtcggccgcggccggcaccgccgtggccaccgacgacggcgagtga
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