Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_2970
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Entry
SCAT_2970 CDS
T01646
Symbol
sigB
Name
(GenBank) RNA polymerase sigma-37 factor (sigma(B))
KO
K03090
RNA polymerase sigma-B factor
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sct03021
]
SCAT_2970 (sigB)
Transcription machinery [BR:
sct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCAT_2970 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_Crp_2
HTH_3
HTH_24
MarR
DUF7343
HTH_31
Motif
Other DBs
NCBI-ProteinID:
CCB75675
UniProt:
F8JQ65
LinkDB
All DBs
Position
3118881..3119711
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AA seq
276 aa
AA seq
DB search
MSVEVGSQKVLPLDAPDAAECGAAINTRTLSRSLFMRLAELPPDSPDRGYVRDTLIELNL
PLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCNRGVEFPTFAMPTVVGEIKRFFR
DTSWSVRVPRRLQELRLALTKASDELAQRLDRSPTVAELAAVLKVSEEDVVDGLAVGNAY
TASSLDSPPPEEDGGEGSLADRLGYEDSALEGVEYRESLKPLLAQLPPRERRIIMLRFFA
NMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLTAE
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaagtgggcagtcagaaggtgcttccgctcgatgcgccggacgccgccgaa
tgcggcgcggccatcaacacgcgcaccctgtcccgttcgctcttcatgcggctcgccgaa
ctcccgccggacagcccggaccggggctacgtccgggacaccctgatcgagctcaacctc
ccgctggtgcggtacgccgcggcccgcttccgcagccgcaacgagccgatggaggacatc
gtccaggtcggcacgatcgggctgatcaaggcgatcgaccggttcgactgcaaccggggc
gtggagttcccgaccttcgccatgcccaccgtggtcggcgagatcaagcgcttcttccgg
gacacctcctggtcggtccgggtcccgcggcgcctccaggagctgcggctggcgctgacc
aaggccagtgacgagctggcccagcggctcgaccgctcccccacggtcgccgaactcgcc
gccgtgctcaaggtttccgaggaggacgtggtcgacggactcgccgtcggcaacgcctac
accgccagctcgctggactccccgccgcccgaggaggacggcggcgagggctccctcgcc
gaccggctcggctacgaggacagcgccctggagggcgtggagtaccgcgagtcgctcaag
ccgctgctggcccaactgccgccccgcgagcggcggatcatcatgctgcgcttcttcgcc
aacatgacgcagtcgcagatcggcgaggaggtcggcatctcccagatgcacgtctcccgg
ctgctcacccgcaccctggcccagctccgcgaggggctcacggccgaatga
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