Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_3619
Help
Entry
SCAT_3619 CDS
T01646
Symbol
rpoA
Name
(GenBank) RNA polymerase (alpha subunit)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
sct03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCAT_3619 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sct03021
]
SCAT_3619 (rpoA)
03400 DNA repair and recombination proteins [BR:
sct03400
]
SCAT_3619 (rpoA)
Enzymes [BR:
sct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCAT_3619 (rpoA)
Transcription machinery [BR:
sct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCAT_3619 (rpoA)
DNA repair and recombination proteins [BR:
sct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCAT_3619 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
CCB76315
UniProt:
F8JZA2
LinkDB
All DBs
Position
3888142..3889161
Genome browser
AA seq
339 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGVVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQQGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDDAGFVETEQY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgagtaccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctgcgtcgt
accctgctctcctcgatccccggtgccgcggtcaccagcatccggatcgacggcgttctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtgaccgacctcatcctcaacatc
aagcagctcgtcgtctcctccgagcacgacgagccggtggtcatgtacctgcgcaagcag
ggccccggcgtggtgaccgccgccgacatcgccccgccggccggtgtcgaggtgcacaac
ccggacctggtgctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgcggtgcagaacaagcagcagggccaggagatcggc
cggatcccggtcgactccatctactcgccggtgctcaaggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcggccgcgggacgcgatggcctcggcgggcaagaccctggtcgagctgttcggc
ctggcccgtgagctcaacgtggacgccgagggcatcgacatgggtccgtccccgacggac
gccgcgctcgccgcggacctggcgctgccgatcgaggagctggagctcaccgtccgctcc
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtcgcgcgcagcgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctgaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgcgttcggcgcggacgacgacgacgccggcttcgtcgagaccgagcagtactga
DBGET
integrated database retrieval system
