Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_3649
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Entry
SCAT_3649 CDS
T01646
Symbol
groEL
Name
(GenBank) chaperonin large subunit
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
sct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCAT_3649 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sct03019
]
SCAT_3649 (groEL)
03110 Chaperones and folding catalysts [BR:
sct03110
]
SCAT_3649 (groEL)
03029 Mitochondrial biogenesis [BR:
sct03029
]
SCAT_3649 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sct04147
]
SCAT_3649 (groEL)
Enzymes [BR:
sct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SCAT_3649 (groEL)
Messenger RNA biogenesis [BR:
sct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SCAT_3649 (groEL)
Chaperones and folding catalysts [BR:
sct03110
]
Heat shock proteins
HSP60 / Chaperonin
SCAT_3649 (groEL)
Mitochondrial biogenesis [BR:
sct03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SCAT_3649 (groEL)
Exosome [BR:
sct04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCAT_3649 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SCAT_3649 (groEL)
Exosomal proteins of breast cancer cells
SCAT_3649 (groEL)
Exosomal proteins of colorectal cancer cells
SCAT_3649 (groEL)
Exosomal proteins of bladder cancer cells
SCAT_3649 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CCB76345
UniProt:
F8JZD2
LinkDB
All DBs
Position
3916686..3918317
Genome browser
AA seq
543 aa
AA seq
DB search
MAKILKFNEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDRYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPSALKRGID
AAVKAVADELIATARPIDSKSDIAAVAALSAQDKQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLEDPYILIHQGKISAIADLLPLLEKVIQ
AGSSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDMAVLTGATV
VAEEVGLKLDQVGLDVLGSARRVTVTKDDTTIVEGAGKSEDVTGRVAQIKAEIETTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAGKVLADSLGKEGDEATGVTVVRNAVVEPLRWIAENAGLEGYVITSKVAELEKGHGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKPAEEESAAAGHGHSHG
HSH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcctgaagttcaacgaggacgctcggcgcgccctggagcgcggtgtcaac
aagctcgccgacacggtgaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgccccgaccatcaccaacgacggtgtcaccatcgcccgcgaggtggag
atcgaggaccgctacgagaacctcggcgcccagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctggcccaggcgctggtccgc
gagggtctgcgcaacgtcgccgccggcgcctccccgtccgccctcaagcgcggcatcgac
gcggccgtcaaggccgtcgccgacgagctgatcgccaccgcccggccgatcgactccaag
tccgacatcgccgccgtggccgcgctctccgcgcaggacaagcaggtcggcgagttgatc
gccgaggcgatggacaaggtcggcaaggacggcgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctcgacttcaccgagggcatggcgttcgacaagggctacctgtcgccg
tacttcgtgaccgaccaggagcggatggaagcggtcctggaggacccgtacatcctcatc
caccagggcaagatctcggccatcgccgacctgctgccgctgctggagaaggtcatccag
gccggctcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcc
accctggtggtcaacaagatccgcggcaccttcaacgcggtcgcggtcaaggcccccggc
ttcggcgaccgccgcaaggcgatgctcggcgacatggcggtcctcaccggcgccaccgtg
gtcgccgaggaggtcggcctcaagctcgaccaggtcggcctcgacgtgctgggctccgcc
cgccgcgtgaccgtcaccaaggacgacaccaccatcgtcgagggcgccggcaagtccgag
gacgtgaccggccgggtcgcccagatcaaggccgagatcgagaccaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgccaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgcctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggcggttccgcgctggtg
cacgccggcaaggtgctcgccgactcgctgggcaaggagggcgacgaggccaccggtgtc
accgtggtccgcaacgccgtcgtcgagccgctgcgctggatcgccgagaacgccggcctg
gagggctacgtcatcacctccaaggtcgccgaactggagaagggccacggcttcaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtgaaggtcacc
cgctccgcgctggagaacgccgcctccatcgcctcgctgctgctgaccaccgagaccctg
gtggtcgagaagccggccgaggaggagtccgccgccgcgggtcacggccacagccacggc
cactcccactga
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