Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_4047
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Entry
SCAT_4047 CDS
T01646
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
sct03420
Nucleotide excision repair
sct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCAT_4047
03430 Mismatch repair
SCAT_4047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sct03400
]
SCAT_4047
Enzymes [BR:
sct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCAT_4047
DNA repair and recombination proteins [BR:
sct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCAT_4047
MMR (mismatch excision repair)
Other MMR factors
SCAT_4047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
CCB76743
UniProt:
F8K4P8
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All DBs
Position
4330991..4334281
Genome browser
AA seq
1096 aa
AA seq
DB search
MASRITDAEQLKEVLGIPFTTEQLACITAPPAPQVVVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALERAGVTEADPADPEQAPGEPRISTYHAFAGQLL
ADHGLRIGLEPQARLLADATRYQLAARVLHTAPGPYPALTKGLPALAADLLALDGELAEH
LVPLDRLREHDTELAGHLDPLDPATRGYAWVGEVRPAVRARTELAGLVERYRAEKNSRDL
LDFGDQIALAATLARERPEVGRTLRQEFAVVLLDEYQDTSVAQRIMLSGLFGAGTGHPVT
AVGDPCQAIYGWRGASVANLDDFPDHFRAADGTPARRYSLSENRRSGGRLLAFANRLAAP
LRARHEGVEALRPAPGAERDGMARCALLPTQDEEIAWLADRIAHLTATGTPPGEIAVLCR
TAGQFAEVHAALVAREVPVEVVGLAGLLHLPEIADLVATCQVLQDPTANAALVRLLTGPR
WRIGPRDLALLGRRARLLVRYGPAGPDPDAPPADRLALAVEGVDPAEVVSLADALETFLE
PQGHDDGLPFSAEARVRFALLAAEIRDLRRSLADPLMDILHRVLAVTGLEVELAASPYAL
AARRRETLQNFLDVAAGFAALDGATTLASFLAFLRTAEQYEKGLDSSLPGGDNTVKVMTA
HKSKGLEWDVVAVPGLVKDAFPSGRVRELWPWHGQVLPYPLRGDAATLPQVTQWTKKGLD
AFKEEMKGHNATEELRLGYVTFTRPRSLLLASGHWWGPTQRRRRGPSEFLLRLREHCEEG
HGEVEHWAEEPADDAENPALDRPADHVWPLPLDPGAFARRKDAADTVRALLAATPPPEED
PSAGGNGPVPALPRQAGDPDGLTPEERRLVMSWDRDLDVLAGELRRAQQRVREVPLPPSL
TATELMRLAADPDAFAAELARPMPREPRPAARRGTRFHAWLESRFDELPLIGLDELPGME
PEAPEEIADERDLAELKEAFLRTPYADRVPYRIEAPFQLRLAGRTVRGRIDAVYRDPDGS
FELVDWKTGRPGTADPLQLAIYRLAWAETHHLPPHHVRACFVHIRTGEIVRPTALPGRAE
LERLIAEEPKAPPQEP
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
gtggcttcccgtatcaccgatgccgagcagctcaaggaggtgctcggcatcccgttcacc
acggagcagctggcgtgcatcaccgcgccgccggctccgcaggtcgtcgtggccggggcc
gggtccggcaagacgacggtgatggccgcgcgggtggtgtggctggtgggcaccggacag
gtggcgccggaacaggtgctggggctgacgttcaccaacaaggccgccggcgagctggcc
gagcgggtgcgcaaggcgctggaacgggccggggtcaccgaggccgacccggccgacccg
gagcaggcccccggggagccgcggatctccacctaccacgccttcgccggccagctcctg
gccgaccacgggctgcgcatcggcctggaaccgcaggccaggctgctcgccgacgccacc
cgctaccagctcgccgcccgcgtgctgcacaccgcccccggcccctaccccgcgctcacc
aaggggctccccgccctcgccgccgacctgctcgcgctcgacggcgagctggccgaacac
ctcgtccccctcgaccggctgcgcgagcacgacaccgagctggccggccacctcgacccg
ctcgaccccgccacccgcggctacgcctgggtcggcgaggtacgccccgcggtacgggcc
cgtaccgagctggccgggctcgtcgagcgctaccgcgccgagaagaacagccgcgacctg
ctcgacttcggcgaccagatagcgctggccgccaccctcgcccgggagcgtcccgaggtg
ggacgcacgctgcgccaggagttcgcggtcgtcctgctcgacgagtaccaggacacctcg
gtcgcccagcggatcatgctctccgggctcttcggcgccggcaccggccacccggtcacc
gcggtgggcgacccctgccaggcgatctacggctggcgcggcgcctcggtggccaacctc
gacgacttccccgaccacttccgcgccgccgacggcaccccggcccgccgctactcgctc
agcgagaaccggcgcagcggcggacgtctgctcgccttcgccaaccggctcgccgctccg
ctgcgcgcccgccacgaaggcgtcgaggcgctgcgccctgcccccggcgccgaacgggac
gggatggcgcgctgcgccttgctgcccactcaggacgaggagatcgcctggctcgccgac
cgcatcgcccacctgacggccaccggcaccccgcccggggagatcgcggtgctgtgccgc
accgccggccagttcgccgaggtgcacgccgccctggtggcccgcgaggtgccggtggag
gtggtggggctggccgggctgctgcacctgccggagatcgccgacctggtcgccacctgc
caggtgctccaggacccgacggccaacgccgccctggtccggctgctcaccggcccccgc
tggcgcatcggcccccgtgacctggcgctgctcggccgccgcgcccgcctgctggtgcgg
tacggaccggccggcccggaccccgacgcgccccccgccgaccggctggcgctcgccgtc
gagggcgtcgaccccgccgaggtcgtctccctcgccgacgccctggagacgttcctggag
ccccagggccacgacgacggcctgccgttctccgccgaggcccgggtacggttcgcgctg
ctcgccgccgagatacgcgacctgcggcgctcgctggccgacccgctgatggacatcctc
caccgggtgctcgccgtcaccggcctggaggtggagctggccgcgtccccgtacgcgctg
gccgcccgccgccgcgagaccctgcagaacttcctggacgtcgcggccggcttcgccgcc
ctcgacggcgccaccaccctcgcctccttcctcgccttcctgcgcaccgccgagcagtac
gagaaggggctcgacagctcgctgcccggcggcgacaacaccgtcaaggtgatgaccgcg
cacaagtccaagggcctggaatgggacgtggtggccgtgcccggcctggtcaaggacgcc
ttcccgagcggccgggtacgcgagctgtggccctggcacggccaggtgctgccgtacccg
ctgcgcggtgacgcggccaccttgccgcaggtcacgcagtggaccaagaaggggctcgac
gccttcaaggaggagatgaagggccacaacgccaccgaggagctgcggctggggtacgtc
accttcacccgtccgcgttcgctgctgctcgcctccggccactggtgggggccgacccag
cgccggcgccgcggcccctcggagttcctgctgcggctgcgcgagcactgcgaggaaggc
cacggcgaggtcgagcactgggccgaggagcccgcggacgacgccgagaaccccgcgctg
gaccgccccgccgaccacgtctggccgctgccgctcgaccccggcgcgttcgcccgccgc
aaggacgccgccgacacggtacgtgccctgctcgcggcgaccccgccgccggaggaggac
ccctcggccggcgggaacggccccgtacccgcgctgccccggcaggccggcgacccggac
gggctcacccccgaggaacgccggctggtgatgtcctgggaccgcgacctcgacgtgctc
gccggggagctgcggcgggcccaacagcgggtgcgcgaggtcccgctgccgccctcgctg
accgccaccgagctgatgcggctggccgccgacccggacgccttcgccgccgaactggcc
cggccgatgccgcgtgagccccgccccgccgcgcgccgcggcacccggttccacgcctgg
ctggagtcgcgcttcgacgagctgccgctgatcggcctggatgagctgcccgggatggaa
ccggaggcacccgaggagatcgccgacgaacgggacctcgccgagctgaaggaagccttc
ctgcgcaccccctacgccgaccgcgtcccctaccggatcgaggcccccttccagctccgg
ctggccggccgcaccgtacgcggccggatcgacgccgtctaccgcgatcccgacggctcc
ttcgaactcgtcgactggaagaccggccgccccggcaccgccgaccccctgcaactcgcg
atctaccgcctcgcctgggccgaaacccaccacctccccccgcaccatgtccgcgcctgc
ttcgtccacatccgcaccggcgagatcgtccgccccaccgccctgcccggccgcgcggaa
ctggaacgcctgatagcggaagaaccgaaagcgccgccccaggagccatga
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