Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_4389
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Entry
SCAT_4389 CDS
T01646
Symbol
hup
Name
(GenBank) DNA-binding protein HU 2
KO
K03530
DNA-binding protein HU-beta
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sct03032
]
SCAT_4389 (hup)
03036 Chromosome and associated proteins [BR:
sct03036
]
SCAT_4389 (hup)
03400 DNA repair and recombination proteins [BR:
sct03400
]
SCAT_4389 (hup)
DNA replication proteins [BR:
sct03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SCAT_4389 (hup)
Chromosome and associated proteins [BR:
sct03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SCAT_4389 (hup)
DNA repair and recombination proteins [BR:
sct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SCAT_4389 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
CCB77085
LinkDB
All DBs
Position
4706405..4707019
Genome browser
AA seq
204 aa
AA seq
DB search
MNKAQLVEAIADKLGGRQQAADAVDAVLDAIVRAVVAGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKGDIAVKKAPKGSLTGGVTVKAAAK
KATAKKATAKKAAAKKAAAQAPAKKTTAKKTTAKKAPAKATAKKATAKKATAKKATAKKT
APAKKAPAKRGSARKTTAKRTASR
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcaatcgccgacaagctcggcggacgccagcaggcc
gcggacgcggtcgacgcggtgctcgacgcgatcgtccgggcggtggtggccggcgagcgg
gtctcggtcaccggtttcggctcgttcgagaaggtggaccgccccgcgcggtacgcccgc
aacccgcagaccggcgaacgcgtccgggtcaagaagacctccgtgccgcgcttccgggcc
ggccagggcttcaaggacctggtcagcggcagcaagaagctgcccaagggcgacatcgcg
gtcaagaaggcccccaagggcagcctgaccggcggggtgaccgtcaaggccgcggcgaag
aaggccaccgcgaagaaggccaccgcgaagaaggcggcggccaagaaggcggcggcgcag
gcccccgcgaagaagaccaccgcgaagaagaccacggcgaagaaggcaccggccaaggcc
acggcgaagaaggccacggcgaagaaggcgaccgccaagaaggccaccgcgaagaagacc
gcgcccgcgaagaaggcgccggccaagcgcggcagcgcccgcaagaccaccgccaagcgg
accgcgagcaggtga
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