Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_4491
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Entry
SCAT_4491 CDS
T01646
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sct03016
]
SCAT_4491 (truB)
Enzymes [BR:
sct01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCAT_4491 (truB)
Transfer RNA biogenesis [BR:
sct03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCAT_4491 (truB)
Prokaryotic type
SCAT_4491 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
CCB77186
UniProt:
F8JTT6
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All DBs
Position
4821716..4822615
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AA seq
299 aa
AA seq
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MRRSGTGPDGLVVVDKPAGLTSHTVVSRIRKLAGTRRVGHAGTLDPMATGVLVIGVERAT
RLLGHLALTSKTYQATIRLGQDTVTDDAEGEVTATASAARVTRAAIDTGIAKLTGDILQV
PAKVSAIKVDGQRSHRLVRAGEEFELAARPVTVSAFTLHEVRQATAADGTPLLDLDVTVD
CSSGTYVRALARDLGADLGTGGHLTALRRTRVGPYTLEQAHTLEQLTDSFGVLPIGEAAA
AAFPRWDVDEEKARRLINGVRQKAPGLGPGPIAVFGPQERFIALVEERRGETKILAGFA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcgctccggcacgggtccggacgggctggtcgtcgtcgacaagcccgccgggctc
acctcgcacaccgtcgtctcccggatccgcaagctggccggcacccggcgggtgggccac
gccggcacgctggacccgatggccaccggcgtgctggtgatcggcgtcgaacgggccacc
cggctcctcggccacctggcgctgaccagcaagacgtaccaggccaccatcaggctcggc
caggacaccgtcaccgacgacgccgagggcgaggtgaccgccaccgcctccgcggcgcgg
gtcacccgggcggcgatcgacaccggcatcgccaagctgaccggcgacatcctccaggtg
cccgccaaggtcagcgcgatcaaggtggacgggcagcgctcgcaccggctggtgcgggcc
ggcgaggagttcgagctggccgcgcggccggtgaccgtctccgcgttcacgctgcacgag
gtgcgccaggccaccgcggccgacggcaccccgctgctcgacctggacgtcaccgtcgac
tgctcctcgggcacctacgtgcgggcgctcgcccgcgacctcggcgccgacctgggcacc
ggcggccacctgaccgcgctgcgccgcacccgggtcggcccctacaccctggagcaggcg
cacaccctggagcagctcaccgactccttcggcgtgctgcccatcggcgaggccgccgcg
gcggcgttcccgcgctgggacgtggacgaggagaaggcccgccggctgatcaacggcgta
cggcagaaggcccccgggctcggccccggccccatagcggtcttcgggccgcaggagagg
ttcatcgcgctggtcgaggagcggcgcggggagacgaagatcctcgccggcttcgcctga
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