Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_4593
Help
Entry
SCAT_4593 CDS
T01646
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
sct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCAT_4593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sct03019
]
SCAT_4593
03400 DNA repair and recombination proteins [BR:
sct03400
]
SCAT_4593
Enzymes [BR:
sct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCAT_4593
Messenger RNA biogenesis [BR:
sct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SCAT_4593
DNA repair and recombination proteins [BR:
sct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SCAT_4593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
OmdA
Motif
Other DBs
NCBI-ProteinID:
CCB77281
LinkDB
All DBs
Position
complement(4943473..4945656)
Genome browser
AA seq
727 aa
AA seq
DB search
MNEPLRTRADAVLRRLVGDPTGTAALREDQWRAVEALVAQGRRALVVQRTGWGKSAVYFV
ATALLRERGGGPTVIVSPLLALMRNQIEAAERAGIRARTINSANTEEWDEVQAEIAAGAV
DVLLVSPERLNNPDFRDSVLPKLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTVLADLP
PGTPVLATTATANARVTADVAEQLGTTGADGDAGGGDTHALVLRGPLDRESLSLGVLRLP
DAAHRLAWLADHLHTLPGSGIVYSLTVAAADEVAAFLRQRGHTVAAYSGRTEDADRRAAE
ADLLANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLL
PGAEDEAIWRYFASLAFPPEEQVRRTLQALADAGRPLSLPALEAMVELRRSRLETMLKVL
DVDGAVRRVRGGWTATGRPWTYDAERYAWVARQRESEQQAMREYATTTGCRMEYLRRQLD
DETAEPCGRCDNCAGARFTTEVSAAALESARAALGRPGVEVEPRRMWPTGMPAIGVDLKG
RIPAGEQASAGRALGRLSDIGWGNRLRPMFAPGAPDGPVPDDVVDAVVTVLADWAKGPGG
WAGGTPGAPARPVGVVTVDSHTRPRLIESLAARVAQVGRMPLLGRVGYAPQAAPERIARS
NSAQRLRALHEAFTVPPELAAALAANPGPVLLVDDLTDSGWTLAVVARLLLRSGASAVLP
LVLAVQG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaccactgcgtacccgcgccgacgccgtcctgcgccggctcgtcggcgacccc
accggcaccgcggccctgcgtgaggaccagtggcgggcggtcgaggcgctggtcgcgcag
ggtcgcagggccctggtggtgcagcgcaccggctggggcaagtcggccgtctacttcgtg
gccaccgctctgctccgcgagcgcggcggcggtcccaccgtgatcgtctccccgctgctc
gccctgatgcgcaaccagatcgaggcggcggagcgggccggcatccgggcccgcacgatc
aactcggccaacaccgaggagtgggacgaggtccaggcggagatcgcggccggcgcggtc
gacgtcctcctggtgagcccggaacgcctcaacaacccggacttccgcgactcggtgctg
cccaagctcgccgccgcgaccgggctgctcgtggtcgacgaggcccactgcatctccgac
tggggccacgacttccgccccgactaccggcggctgcgcaccgtgctcgccgacctcccg
cccggcaccccggtgctggccaccaccgccaccgccaacgcccgggtcaccgcggacgtg
gccgagcaactgggcaccaccggcgcggacggcgacgcgggcgggggcgatacgcacgcc
ctggtgctgcgcgggccgctggaccgcgaatccctctcgctcggtgtactgcgcctgccg
gacgccgcccaccggctggcctggctcgccgatcacctccacaccctgccgggctcgggc
atcgtctacagcctcaccgtggccgcggccgacgaggtggccgccttcctgcggcagcgc
ggacacaccgtggccgcctactccggccgcaccgaggacgccgaccgccgcgccgccgag
gccgacctgctggccaaccgggtcaaggcgctggtggccacctccgccctgggcatgggg
ttcgacaaacccgacctgggcttcgtggtccacctggggtcgccctcctcccccatcgcc
tactaccagcaggtgggacgggccggccgcggggtcgagcacgcggaggtcctgctgctg
ccgggcgccgaggacgaggccatctggcgctacttcgcctcgctcgccttccctcccgag
gagcaggtgcgccgcaccctccaggccctcgccgacgccggccgcccgctgtcgttgccg
gccctggaggccatggtcgaactgcgccggtcgcggctggagacgatgctgaaggtcctc
gacgtggacggcgcggtacgccgggtgcgcggcggctggacggcgaccggccggccgtgg
acgtacgacgccgagcggtacgcctgggtggcccggcagcgcgagtccgagcagcaggcg
atgcgcgagtacgccaccaccaccgggtgccggatggaatacctgcggcggcagttggac
gacgagacggccgagccgtgcggccgttgcgacaactgcgccggggcccgcttcaccacc
gaagtctccgccgccgccctggagtcggcgcgggcggccctcggcaggcccggtgtcgag
gtcgaaccgcgtcggatgtggccgaccggcatgccggccatcggagtcgacctcaagggg
cgtatcccggccggggagcaggcgtcggcggggcgggcgctgggccggctgtcggacatc
gggtggggcaaccggctgcggccgatgttcgccccgggcgcgcccgacgggccggtgccg
gacgacgtggtggacgccgtggtcacggtgctcgccgactgggccaaggggcccgggggt
tgggccggcggcacgcccggagcccccgcccggccggtgggcgtggtcaccgtcgactcg
cacacccggccacggctgatcgagtcgctggcggcacgcgtggcgcaggtgggccggatg
ccactgctcggccgggtcggctacgcgccgcaggccgcgccggagcgcatagcccggtcc
aacagcgcgcagcggttgcgcgcgctgcacgaggcgttcaccgtcccgccggagctcgcc
gcggcgctggcggccaaccccggtccggtgctgctcgtcgacgatctgacggattccggt
tggacgctggcggtggtcgctcgtctcctgctgcgttcgggcgcgtcggcggtgctgccg
ctggtcctggccgtgcagggctga
DBGET
integrated database retrieval system
