Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_4895
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Entry
SCAT_4895 CDS
T01646
Symbol
sigF
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sct03021
]
SCAT_4895 (sigF)
Transcription machinery [BR:
sct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCAT_4895 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
MarR_2
HTH_23
HTH_Crp_2
HTH_28
GerE
DUF134
MarR
HTH_3
HTH_24
HTH_29
HTH_26
Sigma70_ECF
YdaS_toxin
NirdL-like_HTH
KORA
DUF7343
HTH_15
Motif
Other DBs
NCBI-ProteinID:
CCB77583
UniProt:
F8JRS5
LinkDB
All DBs
Position
5282943..5283827
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AA seq
294 aa
AA seq
DB search
MRRTPDSHPAGPARTRKRPAAATATATAARHPARPHRARRTSHPHDDAPDTTDAFRRIAT
LPDGPERDRLRKEVVAAWIPMAERLATRFRNRGEAVEDLKQVAALGLVKAVDRYDPERGT
AFASFAVPTVVGEVKRHFRDHLWGLHVPRRVQELRNRVRTARNDLTQSIDGRGPTVAEIA
EHAGLSEEEVLLGLEAIDSFSTMSLDAELPGSDGYTLVDTLGLPDPGMDAVVDRESVKPR
LRQLPERERTILYLRFFDDMTQSQIARIMGISQMHVSRLINRTCARLRAEILAE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtacccccgattcccacccggccggccccgccaggacccgcaagcgcccggca
gccgccacagccaccgccaccgccgcccgtcaccccgcccggccgcaccgcgcccggcgc
acctcccacccgcacgacgacgcccccgacaccaccgacgccttccgccggatagccacc
ctgccggacggcccggaacgggaccggctgcgcaaggaggtggtggcggcgtggataccc
atggccgaacgcctcgccacccggttccgcaaccgcggcgaggccgtcgaggacctcaag
caggtggccgcgctcggcctggtcaaggccgtcgaccggtacgacccggaacgcggcacc
gcgttcgccagcttcgcggtgcccaccgtggtcggtgaggtcaaacgccacttccgcgac
cacctgtgggggctgcacgtaccccgccgggtgcaggaactgcgcaaccgggtccgtacc
gcccgcaacgacctgacccagtccatcgacggacgcggccccaccgtcgccgagatcgcc
gaacacgccgggctcagcgaggaggaggtgctcctcggcctggaggcgatcgacagcttc
tccaccatgtcgctcgacgccgaactgcccggctccgacggctacacgctggtcgacacc
ctcggcctgcccgaccccggcatggacgccgtggtcgaccgggaatcggtcaaaccccgg
ctgcggcaactacccgaacgcgaacgcaccatcttgtacctgcggttcttcgacgacatg
acgcaaagccagatagcccgcatcatgggcatctcgcaaatgcacgtctcccggctgatc
aaccgaacctgcgcccggctgcgcgccgagatcctggccgagtga
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