Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_5800
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Entry
SCAT_5800 CDS
T01646
Name
(GenBank) RNA polymerase sigma-E factor (modular protein)
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sct03021
]
SCAT_5800
Transcription machinery [BR:
sct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCAT_5800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
PhyR_sigma2
HTH_23
Sigma70_ECF
DUF6502
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
CCB78487
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All DBs
Position
6258331..6259272
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AA seq
313 aa
AA seq
DB search
MVAHRADGAGGEPGRTVRGASGGRLSGDGAGLRPSGGAPRDPAATQPAAGVEQESAQDRT
ARFERDALVHLDQLYAAALRLTRDRQDAEDLVQETYARAYRCFHQFRPGTNLRAWLQRIL
TTTFINAYRKKKTEPPQAPAGQIEDWQLAGAASRLPAGGESAETAALRRIFDPAVAEAMS
SIPYDLRLVVYLADVEGYAYREIAALTGVPQGTVTSRLHRARRRLRVLLAPYDPGHGAGH
GAPRPGEGGPPGCQRPRGGGREAPARGRIPAQRGHRTPAPASVPASAATAGSAVPAVSGA
GRPGGGAGQGGAG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtggttgcgcaccgggcggacggcgccgggggagagccgggccggacggtgcggggggct
tccggcgggcggttgtccggggacggcgccgggttgcgcccgtccggcggtgcgccgcgg
gatccggccgcaacgcagccggcggccggcgtggagcaggagagcgcgcaggaccgcacc
gcgcggttcgagcgggacgcgctggtccatctcgaccagctgtacgccgcggcgctgcgg
ctgacccgggaccggcaggacgccgaggacctggtgcaggagacgtacgcgcgcgcgtac
cggtgcttccaccagttccggccggggaccaatctgcgggcgtggctgcagcggatcttg
acgacgacgttcatcaacgcctaccgcaagaagaagaccgagccgccgcaggcgccggcc
gggcagatcgaggactggcagctggcgggggcggcctcgcggctgccggcgggcggggag
tcggccgagacggcggcgctgcgccggatcttcgacccggcggtggccgaggcgatgtcg
tcgatcccctacgacctgcggctggtggtctacctggccgatgtcgagggctacgcctac
cgggagatcgcggcgctgaccggggtgccgcagggcaccgtgacctcccggctgcaccgt
gcgcggcgccggctgcgggtgctgctggccccctacgatcccggtcacggcgccggccat
ggcgcgccccggccgggggaggggggcccgccggggtgccagcggccacgcggcggcggg
cgggaggcgccggcgcgcgggcggatccccgcccagcgcggccaccgcacccccgccccc
gcctccgtccccgcctccgccgcgacggcgggttccgccgtgcccgcggtctccggcgcg
ggccggccgggcggcggggccgggcaggggggtgcgggttag
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