Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_p0744
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Entry
SCAT_p0744 CDS
T01646
Symbol
sigF
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sct03021
]
SCAT_p0744 (sigF)
Transcription machinery [BR:
sct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCAT_p0744 (sigF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
HTH_3
MarR_2
HTH_10
HTH_24
HTH_37
DUF7343
HTH_31
MarR
Motif
Other DBs
NCBI-ProteinID:
CCB71770
UniProt:
F8JN62
LinkDB
All DBs
Position
pSCAT:827075..827974
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AA seq
299 aa
AA seq
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MSVQLTEEVTTPVGGDEADDAGLEAAGKQGFDERLDAALLDGAASAAEVRQISKVMFARL
AVLEEGTEEYQYVRNTLIELNMALVRFAAKRFGNRAEQMEDILQVGTIGLIKAVDRFDPD
YGVEFVTFALPTIIGEMKRFFRDTSWSVRVPRRLQELRIDLAKATDALAAELDRAPTTAE
LAARLDIGEEEVVEAQVAANAYTASSIDAQAGDDEDDGTAWADRLGAEDPALEGVENLTA
LAPLVAELPERERAILAMRFSADMTQKQIGERLGISQMHISRLLSRTLGKLREGLLAES
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtccagctcacggaagaggtcaccacgccggtcggcggggacgaggcggatgac
gcggggctggaggcagccgggaagcaggggttcgacgaacggctggacgccgcgctgctg
gacggcgccgcgagcgcggccgaggtgcgccagatctccaaggtgatgttcgcgcggctg
gcggtgctggaggagggcaccgaggagtaccagtacgtacgcaacacgctcatcgaactc
aacatggctctggtgcgtttcgccgccaagcgcttcggcaaccgggccgagcagatggag
gacatcctccaggtgggcacgatcggtctgatcaaggcggtggaccggttcgaccccgac
tacggtgtggagttcgtcaccttcgcgctgccgacgatcatcggggagatgaagaggttc
ttccgggacaccagttggtcggtgcgggtgccgcggcgcctgcaggagctgcggatcgac
ctggccaaggcgaccgacgcgctcgccgccgagctcgaccgcgccccgaccaccgcggag
ctggcggcgcggctggacatcggcgaggaagaggtggtcgaggcgcaggtcgccgccaac
gcctacaccgcctcctcgatcgacgcgcaggcgggcgacgacgaggacgacggcaccgcg
tgggccgaccgcctcggcgccgaggacccggcgctggagggcgtggagaacctcaccgcg
ctcgccccgctcgtcgccgagttgccggagcgtgaacgcgccatcctggccatgcggttc
agcgccgacatgacgcagaagcagatcggcgagcggctgggcatctcgcagatgcacatc
tcgcggctgctgtcgcggacgttgggcaagctgcgggagggtctgctcgcggagagctga
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