Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_p1422
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Entry
SCAT_p1422 CDS
T01646
Name
(GenBank) putative RNA polymerase ECF-subfamily sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sct03021
]
SCAT_p1422
Transcription machinery [BR:
sct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCAT_p1422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
DUF4440
Sigma70_r4
DUF1488
Motif
Other DBs
NCBI-ProteinID:
CCB72446
UniProt:
F8JKD9
LinkDB
All DBs
Position
pSCAT:1501664..1502566
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AA seq
300 aa
AA seq
DB search
MNAHDALAADFETHRDRLRAVAHRLLGSHGEAEDAVQEAWLRLARADADAIDTMGGWLTT
TVSRICLDMLRSRAARRERPAGLPGPEEDRDTGVDGDPEQRTLLADSVGRAVLVVLVRLG
PAERVAFVLHDMFAVPFGEIAPVVGRSLAAAKQLASRARRKVRGAPAVSGAELARQRGVV
EAFLAASRAGDLDAILAVLAPDVVRRADPAAPVAGRPAEVTGAHAVAREIAVFGRNAHLA
EALLVDGVVGIAVAPYGRLRLAVLVTSAGDRVTGYELVAAPDRLRGLELALLDAGRPWNA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgcgcacgacgccctcgcggcggacttcgagacgcaccgcgaccgcctgcgcgcg
gtcgcccaccgcctgctcggctcgcacggcgaggcggaggacgccgtgcaggaggcctgg
ctgcggctggcccgcgccgacgcggacgccatcgacaccatgggcggttggctcaccacc
acggtctcccggatctgcctggacatgctgcgttcccgcgccgcccggcgggagaggccg
gccgggctgccggggcccgaggaggaccgggacaccggcgtggacggcgacccggaacag
cggacactgctggccgactcggtgggacgcgccgtgctggtcgtcctggtccggctgggc
cccgccgaacgggtcgccttcgtgctgcacgacatgttcgcggtgccgttcggcgagatc
gcgcccgtcgtcggccgctcgctcgccgccgccaagcaactcgccagccgggcccgccgc
aaggtgcgcggcgccccggccgtgtccggtgcggaactcgcgcgccagcgcggcgtggtg
gaagccttcctggcggcgtcgcgggcgggcgacctcgacgcgatactcgccgtcctcgcc
cccgacgtcgtacggcgcgcggaccccgcggcgccggtcgcgggccggccggccgaggtg
accggcgcccacgccgtggcccgggagatcgccgtcttcgggcggaacgcgcacctcgcg
gaggcactgctggtcgacggcgtcgtgggcatcgcggtggcgccgtacggccggttgcgg
ctcgccgtcctcgtcaccagcgccggcgaccgggtcaccggctacgaactggtcgccgcc
ccggaccggctgcgcgggctggagctggcgttgctcgacgcggggcggccctggaacgcg
tag
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