Sorangium cellulosum So0157-2: SCE1572_08405
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Entry
SCE1572_08405 CDS
T02718
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scu
Sorangium cellulosum So0157-2
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scu03032
]
SCE1572_08405
03400 DNA repair and recombination proteins [BR:
scu03400
]
SCE1572_08405
Enzymes [BR:
scu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SCE1572_08405
DNA replication proteins [BR:
scu03032
]
Prokaryotic type
DNA Topoisomerases
SCE1572_08405
DNA repair and recombination proteins [BR:
scu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCE1572_08405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AGP34525
UniProt:
S4XRN9
LinkDB
All DBs
Position
2340293..2341669
Genome browser
AA seq
458 aa
AA seq
DB search
MPSASAKTPRSRRRPRSTPRRARRSAPSGAVVRRHRVSLSIETVETVELARTAGELAAAA
PLTPSPVESAKSAGLRYVNDGEPGISRRKVGKGFKFLDPEGRPIKDEATLQRIRRLAIPP
AWTGVWICQSERGHIQATGRDARGRKQYRYHPRWREVRDETKYDRMLAFGAALPAIRAAV
ERDLALPGLPREKVLATVVRLLDETSIRIGNDEYARDNNSYGLTTLHDEHVEIKGDLIRF
HFRGKSGKEHELTVRDRRLARIVKRCQDVPGHELFQYIDGDGQRQRIHSDDVNEYLRSLA
GQEFTAKDFRTWTGTVLCASFFCEMEVATSARQMKKCVAQVIDMVSARLGNTRAVCQRCY
VHPAVIRAYTEGALQTLLEAEEAVMDEAIAALRPEEATMLRIVRGFSERDAVPLATQLRE
SVRAVEARRADRSAARPKSGVKRPKSAKRPSGQRRAAA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgccagcgccaagaccccccgatccaggcgccgcccgcggagcacgccgcgc
cgcgcgcggcgctccgccccgagcggcgccgtcgtccggcggcaccgcgtcagcctgtcg
atcgagaccgtcgagacggtcgagctggcgcgcaccgcgggcgagctcgcggcggccgcg
ccgctcaccccgtcgccggtcgagtccgcgaaatcggccgggctccggtacgtgaacgac
ggcgagccgggcatctcccgccggaaggtgggcaagggcttcaagttcctcgaccccgag
gggcgccccatcaaggacgaggcgaccctccagcggatccggcgcctcgcgatcccgccc
gcgtggaccggggtgtggatctgccagagcgagcgcgggcacatccaggccaccggccgg
gacgcgcgcggccggaagcagtaccggtatcacccgcgctggcgcgaggtccgcgacgag
acgaagtacgatcgcatgctcgcgttcggcgcggcgctcccggcgatccgcgcggcggtg
gagcgcgatctcgcgctgccggggctcccgcgcgagaaggtgctggcgaccgtggtgcgc
ctgctcgacgagacgtcgatccgcatcgggaacgacgagtatgcgcgcgacaacaactcg
tacggtctgacgacgctccacgacgagcacgtcgagatcaagggcgatctcatcaggttc
cacttccggggcaagagcggcaaggagcacgagctgacggtgcgggaccggcggctcgcg
cgcatcgtgaagcgctgtcaggacgtgcccggccacgagctgttccagtacatcgacggc
gacggccagcggcagcgcatccactcggacgacgtgaacgagtacctgcgctccctcgcg
gggcaggagttcacggcgaaggacttccgcacctggaccggcacggtgctgtgcgcgtcc
ttcttctgcgagatggaggtcgccacctctgcccgccagatgaagaagtgcgtggcgcag
gtgatcgacatggtgtccgcccgcctcggcaacacgcgcgcggtctgccagcgttgctat
gtccaccccgcggtgatccgcgcctacaccgagggggccttgcagaccttgctcgaggcg
gaagaggcggtcatggacgaggcgatcgcggcgctccggcccgaggaggccacaatgctc
cggatcgtccgcggattcagcgagcgcgacgcggtgccgctcgccacccagctccgcgag
agcgtgcgcgcggtcgaggcccggcgggcggacaggagcgcagcgcgcccgaagagcggc
gtgaagcgcccgaagagcgcgaagcgcccgagcgggcagcggcgcgccgcagcctga
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