Sorangium cellulosum So0157-2: SCE1572_10420
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Entry
SCE1572_10420 CDS
T02718
Name
(GenBank) hypothetical protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu02020
Two-component system
scu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCE1572_10420
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SCE1572_10420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scu03021
]
SCE1572_10420
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scu02035
]
SCE1572_10420
Transcription machinery [BR:
scu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCE1572_10420
Bacterial motility proteins [BR:
scu02035
]
Flagellar system
Flagellar assembly proteins
Stator
SCE1572_10420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGP34889
UniProt:
S4XQV1
LinkDB
All DBs
Position
2894446..2895114
Genome browser
AA seq
222 aa
AA seq
DB search
MRTPEDRLLAEGLDLLQLVAKRVARRLGRRIPVEDLVALGHPALLDVVRTYDPGRSSFEA
YAKRKIRWAIFDGIRRETRWRSAAARASALAASARFAEGRGAEDDADAPATQEDYAARLG
SLLAGHAAAMALGLLSNQGDVAAVPDAADSPEERASAAELAQAVRHAVRELPERERALVE
RHYFDDERFDRIAQDLGISKSWASRLHSQAIARLGELLRAMR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcactccggaagaccggctgctcgccgaggggctcgatctgctccagctggtcgcg
aagcgcgtcgcgcgccgcctgggccgccgcatcccggtcgaggacctcgtcgcgctcggg
cacccggcgctgctcgacgtggtgcggacgtacgatccaggtcgatcctcgttcgaggcg
tatgccaagcggaagatccgctgggcgatcttcgacggcatccggcgggagacgcgctgg
cgatctgcggcggcgcgggccagcgcgctggctgcgtcggcgcggttcgcggaggggcgg
ggggcggaggacgacgccgacgcgccggccacgcaggaggactacgccgcgcggctcggc
agcctgctcgccgggcacgcggccgcgatggcgctcggcctgctctcgaaccagggcgac
gtcgctgcggtgccggacgccgccgacagccccgaggagcgcgcctccgccgccgagctc
gcgcaggccgtgcggcacgccgtgcgcgagctccccgagcgcgagcgcgccctcgtcgag
cgccactacttcgacgacgagcgcttcgatcggatcgcgcaggatctcggcatcagcaag
agctgggcgagccgcctgcacagccaggcgatcgcgcggctgggcgagctgctccgcgcg
atgcgctga
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