Sorangium cellulosum So0157-2: SCE1572_13005
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Entry
SCE1572_13005 CDS
T02718
Name
(GenBank) hypothetical protein
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCE1572_13005
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scu01001
]
SCE1572_13005
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scu03009
]
SCE1572_13005
Enzymes [BR:
scu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
SCE1572_13005
Protein kinases [BR:
scu01001
]
Serine/threonine kinases: Other
RIO family [OT]
SCE1572_13005
Ribosome biogenesis [BR:
scu03009
]
Eukaryotic type
Pre-40S particles
Kinases
SCE1572_13005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
TCAD9
APH
YrbL-PhoP_reg
Motif
Other DBs
NCBI-ProteinID:
AGP35359
UniProt:
S4XS69
LinkDB
All DBs
Position
complement(3582668..3584053)
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AA seq
461 aa
AA seq
DB search
MQIPSNLTSLVDEGLIDEVVRPLMSGKEAVVFLVRSGGELRVAKVYKEAQNRSFKNRAAY
TEGRKVRNSRDQRAMDKRSRHGRAQDEAAWRSTEVDMIYRLRGAGVRVPMPYHAIDGVLL
MELVTDADGSPAPRLAETSLDRDQATWVYHRLIGEVTRMLCAGVVHGDLSDFNVLMSADG
PVIIDFPQSVDAAKNQNARQLLLRDVDNLHRFLTRFVPEQRRAAYGEEMWELYACGALTP
EARLTGRHRVSERRVDTRAVLDLIGDANYDERKRRERQGLSMRGAPKTTPSPAPAPAPEA
PTTDGRTTDPRDRPRQAERPAAHAGNGGGPRPRQHGPGRRPQNAGPDKRPQHAGNAPAQR
PPQHPSGQPPVQYEAGQRPQRHRPDHRPAQHATAQRPAQHEAPHRPQQHEAPHEAPHRPQ
RTGRSSTRRRTGLNSTRRRKSRRSKGRPRRRRGHAAVSSSR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattccgagcaacctcacgtcgctggtcgacgaagggctcatcgacgaggttgtg
cggccgctgatgagcggaaaggaagcggtggtcttcctcgtccggtcgggcggcgagctg
cgcgtcgcgaaggtctacaaagaagcgcagaaccgcagcttcaagaaccgcgcggcgtac
accgagggccgcaaggtgcgcaacagccgcgaccagcgcgcgatggacaaacgctcgcgc
cacggccgggctcaggacgaagccgcctggcgctcgaccgaggtcgacatgatctaccgc
ctgcgcggcgcaggcgtccgcgtgccgatgccgtaccacgcgatcgacggcgtgctcctg
atggagttggtcaccgacgccgacggcagccccgcgccccgcctcgccgagacgagcctc
gaccgagatcaggccacgtgggtctaccatcgcctgatcggcgaggtcacgcggatgttg
tgcgccggcgtcgtgcacggcgatctgtcggacttcaacgtgctcatgagcgccgacggg
ccagtgatcatcgacttcccccagtcggtggacgccgcgaagaaccagaacgccaggcag
ctcctgctccgtgacgtcgacaacctccatcgcttcctcacgcgcttcgtgcccgagcaa
cggcgagccgcctatggtgaggagatgtgggagctctacgcctgcggcgcgcttacccct
gaggcccgattgaccggccgccatcgggtctccgagcgaagggtggacacccgcgccgtg
ctcgacctcatcggcgacgcgaactacgacgagcgcaagcgccgcgagcgtcagggcctc
agcatgcggggagcgccgaagaccaccccatcgcccgcgcccgcccccgcccccgaggcg
cccacgaccgacgggcgaacgaccgatccgcgggaccgaccgcggcaggcggagaggccg
gctgcgcatgccgggaatgggggcgggccaaggccgcggcagcacggaccagggcgaagg
ccgcaaaacgccgggcctgacaagaggccgcagcacgcgggcaacgcgcctgcccaaagg
ccaccgcagcacccatcaggacaaccgccggtgcagtacgaggcggggcagcgaccacag
cggcatcggccagaccatcggccggcccagcatgcgacggcgcaacggcccgcgcagcac
gaggcgccgcacaggccgcagcagcacgaggcgccgcacgaggcgccgcacaggccgcag
cgcacaggccgcagcagcaccaggcgccgcacaggcctcaacagcaccaggcgacgcaag
agccgccgcagcaaggggaggcccaggcggcgtcgcggccacgccgccgtgtcgtcatct
cggtga
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