KEGG   Sorangium cellulosum So0157-2: SCE1572_15640
Entry
SCE1572_15640     CDS       T02718                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
scu  Sorangium cellulosum So0157-2
Pathway
scu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SCE1572_15640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scu03019]
    SCE1572_15640
Messenger RNA biogenesis [BR:scu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SCE1572_15640
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1 Lactamase_B_3 Lactamase_B_6
Other DBs
NCBI-ProteinID: AGP35812
UniProt: S4XRI4
LinkDB
Position
complement(4365709..4367298)
AA seq 529 aa
MLIEEDGRRVLVDCGVMFPNDQVLGVEVAIPDLSYVREAGGVDAVIVTHGHEDHIGGLPS
LLREFPVPVYGTRFTLRLVRERLVEHGIDVPLREVEPQRHFTAGPFRAEPLRVTHSIPDA
VGFAIETGEGILIHTGDYKIDLTPVGGERLDLGRFAEYGRAGVAALLSDSTNSERDGWSV
SETAVAEGFLRPFREAKGRILVALFASNVHRVQSVLDLAAQLGRKVVLAGRSLATNTRIA
EEIGILTIPPGVLVDDATAAALPRERLIVLASGAQGEPNSALARMAVGDHHRLRVDPGDT
VIFSSRAIPGNEIAVSQLANRLARRGAVVLDRGLDPIHASGHAQAEEQKVLLDAVRPEHF
VPIHGEYRMLLAHARTALRMGVPASGVFVVEDGESLVIEDGRMRLGDAVKSGRVWLDGRG
GLDVSELVLREREQISDQGLVMVLVVADRKTGEVLRGPELLGRGVAHFEEGGPLFAAALA
SARDALAALSPGARTLAPALEDALSRGVRRVFRREASRRPAVLPLAVLL
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgctgatcgaggaggatggccgccgcgtgctcgtcgactgcggcgtcatgttccccaac
gaccaggtgctcggcgtcgaggtggcgatccccgacctcagctacgtgcgcgaggcgggc
ggggtcgacgcggtgatcgtgacgcacggccacgaggatcacatcggcgggctgccgtcg
ctgctgcgcgagttcccggtccccgtgtacgggacgcgcttcaccctccggctcgtgcgc
gagcgcctcgtcgagcacggcatcgacgtgccgctccgcgaggtcgagccccagcggcac
ttcacggcgggcccgttccgcgccgagcccctgcgcgtgacccactccatccccgacgcg
gtcggcttcgcgatcgagacgggcgagggcatcctcatccacaccggcgactacaagatc
gatctcacccccgtgggcggcgagcggctcgatctcggccgcttcgccgagtacggccgc
gccggcgtggcggccctcctgtccgactccaccaactccgagcgcgacggctggtcggtg
agcgagaccgcggtggccgaggggttcctccggccgttccgcgaggcgaagggccgcatc
cttgtcgcgctgttcgcctccaacgtccaccgggtccagagcgtcctcgacctcgccgcc
cagctcggccgcaaggtcgtgctcgccgggcgcagcctcgcgaccaacacgcggatcgcc
gaggagatcggcatcctgaccatcccccccggcgtgctcgtcgacgacgccacggcggcc
gcgctcccgcgcgagcgcctcatcgtgctcgcctcgggcgcgcagggcgagccgaacagc
gcgctcgcgcgcatggccgtcggcgatcaccaccggctgcgggtcgacccgggcgacacg
gtgatcttctcgtcccgcgccatccccggcaacgagatcgccgtcagccagctcgccaac
cgcctggcgaggcgcggcgccgtggtgctcgatcgcggcctcgatccgatccacgcgagc
ggccacgcccaggctgaggagcagaaggtgctcctcgacgcggtccggccggagcacttc
gtcccgatccacggcgagtaccggatgctgctcgcccacgcgcgcacggcgctccggatg
ggcgtgccggcgtcgggggtcttcgtggtcgaggacggcgagtcgctggtcatcgaggac
ggccggatgcggctcggggacgcggtgaagagcgggcgcgtgtggctcgacgggcgcggc
gggctcgacgtctcggagctggtgctgcgcgagcgcgagcagatctcggatcagggcctc
gtgatggtgctggtcgtggccgaccgcaagacgggcgaggtcctgcgcggccccgagctc
ctggggcgcggggtggcgcacttcgaggagggtggcccgctgttcgcggccgcgctcgcg
agcgcgcgcgacgcgctcgcggcgctgtcgccgggggcgcgcacgctggcgccggcgctg
gaggacgcgctcagccgcggcgtgcggcgggtgttccggcgcgaagcctcgcgccgcccc
gccgtgctccccctggccgtgctcctgtga

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