Sorangium cellulosum So0157-2: SCE1572_21365
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Entry
SCE1572_21365 CDS
T02718
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu03420
Nucleotide excision repair
scu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCE1572_21365
03430 Mismatch repair
SCE1572_21365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scu03400
]
SCE1572_21365
Enzymes [BR:
scu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCE1572_21365
DNA repair and recombination proteins [BR:
scu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCE1572_21365
MMR (mismatch excision repair)
Other MMR factors
SCE1572_21365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PHP_C
AAA_11
Zn_ribbon_Brz
Motif
Other DBs
NCBI-ProteinID:
AGP36819
UniProt:
S4XWD5
LinkDB
All DBs
Position
complement(6030553..6033837)
Genome browser
AA seq
1094 aa
AA seq
DB search
MRFYADLHVHSKYSRATSSDCDLAHLSYWAQRKGIAVIGTGDFTHPAWMAELRERLVPAE
PGLFRLRDDLGRVVSERLPGACRGETRFMLSVEISTIYKKGDRTRKIHHLLYAPDFEAAD
RIVRALSKIGNLTADGRPILGLDSRHLLEIVLESGEGSYLVPAHIWTPWFSVLGSKAGFD
AVEECYGDLAPHIFALETGLSSDPAMNWRISGLDRYRLVSSSDAHSPAKLGREATAFDAP
LDYFAIRRALETGQGFGGTVEFFPEEGKYHLDGHRKCNVVLSPAETRARSLACPVCGHPV
TVGVLHRVEELADREEGVRPEGASEFRNLVPLPEVLAELHGVGASSKVVQRSYDGVLSRL
GPELFLLGDAPLDEIARAGTPLLSEAIARMREGRVIRDAGYDGEYGVIRVFQPEELTQRR
GGGLLFQPEPAAPEPPSAPARPPAPPRASDASRPPPRRGRAHAERAPGPPGEAPLGAPPG
GGPRRGAALLDGLDPEQRAAAELTEGAVLLLAGPGTGKTRTLTHRIAHLVLDLGVPPEQC
LAITFTRRAADEMRERLVALLGEAGGRVPAMTFHALGLSLLREHARAAGAAPPGIAGERE
RMAMLAAALNVPERRAARLLADIAALKRRYPRHADAPRPQEGAPAEGGEIDRHLDRAWKV
YEDELAARGLLDLDDLVGHAALLLEAQGDALAAARARARVLSIDEYQDIDERQYRLVRAL
VPPGGNVCAIGDPDQAIYGFRGADVGFFFRFQQDFPAARVVRLKRNYRSSRPIVEAALQV
IAPSPTLGARELLPSAVGVELVAVHESPTEAAEAERVVHTIERMLGGSTFFSMDSGRVDS
PAAGGEYSFSDFAVLYRTEAQSEPLREAFARSGMPFQRRSERRLIERAASEALARALAGA
PPGPLAARLKAAAARLREEIAQPAVDVAPPAEGAARLGEADVDAALELLLPLAERCGGDL
DRFLIDLAVSTEIDAWDPRADRISLLTLHAAKGLEFRVVFLVGCEDGLLPLRFPGREETD
VAEERRLFYVGMTRARERLFLTRAMQRARHGKVVETEISPFVREVEERLLLRAGPSPEAQ
KRPRAAADRQMKLF
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttatgccgaccttcacgtgcattcgaaatattcgcgcgccacgagcagcgat
tgcgatctcgcgcacctgagctactgggctcagcgcaagggcatcgcggtgatcggcacg
ggggatttcacccatccggcgtggatggccgagctccgcgagcgcctcgtgcccgccgag
cccggcctcttccgcctgcgagacgacctgggccgcgtcgtgtcggagcgtctccccggc
gcgtgccgcggggagacccgcttcatgctctcggtggagatctcgaccatctacaagaag
ggcgatcggacgcgcaaaatccatcatctcctctatgcgccggacttcgaggccgcggac
cggatcgtccgcgcgctctcgaagatcggcaacctgaccgccgacgggcggccgatcctg
gggctcgattcgcgccacctgctcgagatcgtgctggagtcgggcgagggctcctacctc
gtgccggcgcacatctggactccgtggttctcggtgctcggctccaaggccggcttcgac
gcggtcgaggagtgctacggcgatctcgccccgcacatcttcgcgctcgagaccgggctc
tcgtccgatcccgcgatgaactggcgcatctccgggctcgatcgctaccggctcgtctcc
agctcggacgcgcactcgcccgcgaagctcggccgcgaggccacggcgttcgacgcgccg
ctcgattacttcgcgatccggcgcgccctggagaccggacagggcttcggcggcacggtg
gagttcttcccggaggagggcaaataccacctcgacggccaccggaagtgcaatgtcgtg
ctgtcgccggcggagacgcgggcgcgctcgctcgcgtgccccgtgtgcgggcacccggtc
accgtgggcgtgctgcaccgggtcgaggagctcgccgaccgcgaggagggggtgcgcccc
gagggcgcgagcgagttccgcaacctggtgccgctgcccgaggtgctggccgagctccac
ggcgtcggcgcctccagcaaggtggtgcagcggagctacgacggggtgctgtcgcggctc
ggccccgagctgttcctcctcggcgacgccccgctcgacgagatcgcgcgcgccgggacg
ccgctcctctccgaggcgatcgcgcggatgcgcgaggggcgcgtgatccgcgacgccggc
tacgacggcgagtacggcgtgatccgggtcttccagccggaggagctcacgcagcgccgc
gggggcgggctcctcttccagcccgagcccgcggcgccggagccgccgtccgcgccggcg
cgccctcccgcgccgccgcgcgcttccgacgcgtcgcggccgcccccgcgccgcggccgg
gcgcacgccgagcgcgcgccggggccccccggcgaggcgcccctcggcgcgccgcccggc
ggggggccccggcgcggcgcggcgctgctcgacgggctcgacccggagcagcgggccgcg
gcggagctcaccgagggcgcggtgctcctcctggcggggccgggcacgggcaagacccgc
acgctcacgcaccggatcgcccacctcgtcctggatctcggcgtgccgccggagcagtgc
ctcgcgatcaccttcacgcgccgggccgccgacgagatgcgggagcggctcgtcgcgctg
ctcggcgaggccggcggccgcgtgccggccatgaccttccacgcgctcggcctctcgctg
ctccgcgagcacgcgcgggccgcgggcgccgctccgcccgggatcgccggcgagcgcgag
cggatggcgatgctcgccgcggcgctcaacgtcccggagcggcgggcggcccggctgctc
gccgacatcgccgcgctgaagcggcgttacccgcgccacgccgacgcgccccggccgcag
gagggcgcgccggccgaaggcggcgagatcgaccgccacctcgaccgcgcgtggaaggtg
tacgaggacgagctcgccgcgcgcgggctcctcgacctggacgatctcgtcggccatgcg
gcgctgctcctcgaggcgcagggcgacgcgctcgccgcggcgcgcgcgcgggcccgggtt
ctctccatcgacgagtaccaggacatcgacgagcgccagtaccggctggtgcgcgcgctg
gtcccgcccggcgggaacgtctgcgccatcggcgatccggatcaggcgatctacggcttc
cgcggcgcggacgtgggcttcttcttccgcttccagcaggacttcccggcggcgcgcgtg
gtgcggctcaagcggaattaccgctcgtcgcgcccgatcgtcgaggcggcgctccaggtg
atcgcgccctcgccgacgctcggcgcgcgggagctcctgccgagcgcggtgggcgtggag
ctcgtggcggttcatgaatcgcccacggaggcggccgaggccgagcgcgtggtgcacacc
atcgagcggatgctcggggggtcgacgttcttctcgatggatagcgggcgggtggactcg
cctgcggcgggcggcgaatactccttctcggatttcgcggtgctctaccggacggaggcg
caatccgagccgctccgggaggcgttcgcccgctcgggcatgccgttccagcggcggtcg
gagcgccgcctcatcgagcgcgcggcctcggaggcgctcgcgcgggcgctggccggcgcc
ccgccggggccgctcgcggcgcggctcaaggcggccgcggcgcggctgcgggaggagatc
gcgcagccggcggtggacgtcgctccgcccgcggagggcgcggcgcgcctcggcgaggcc
gacgtggacgcggcgctggagctgctcttgccgctcgcggagcgctgcggaggggatctc
gatcgcttcttgatcgacctcgcggtgagcaccgagatcgacgcgtgggatccgcgggcc
gaccgcatctcgctgctcacgctgcacgcggccaaggggctcgagttccgggtggtcttc
ctggtggggtgcgaggacggcctgctcccgttgcggttccctggcagggaggagaccgac
gtcgccgaggagcgccggctcttctatgtcggcatgacgcgggcgcgagagcggctgttc
ctcacccgcgcgatgcagcgcgcgcggcacggcaaggtggtcgagaccgagatctcgccg
ttcgttcgcgaggtcgaggagcggctgctcctgcgggccggtccgtcgccggaggcgcag
aagaggccgcgcgcggcggcggatcgccagatgaagctgttttag
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