Sorangium cellulosum So0157-2: SCE1572_31020
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Entry
SCE1572_31020 CDS
T02718
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scu
Sorangium cellulosum So0157-2
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scu03032
]
SCE1572_31020
03400 DNA repair and recombination proteins [BR:
scu03400
]
SCE1572_31020
Enzymes [BR:
scu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SCE1572_31020
DNA replication proteins [BR:
scu03032
]
Prokaryotic type
DNA Topoisomerases
SCE1572_31020
DNA repair and recombination proteins [BR:
scu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCE1572_31020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_Top1
Topoisom_bac
Zn_ribbon_recom
DUF1272
Zn_ribbon_RPB9
Zn_ribbon_8
DUF7575
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AGP38518
UniProt:
S4Y6L8
LinkDB
All DBs
Position
complement(8815172..8816296)
Genome browser
AA seq
374 aa
AA seq
DB search
MKEGEALAVTPPGVVTDQKFTQPPPRYNEGSLVRELEKRGIGRPSTYAEIISKVQQRAYV
EKREGGAFQPTLLGKFVVDGLVRSNLDIMDPNFTAQMEEELDAVGAGNLKREQLLKRFYK
KFREQLDKSKKLAPWKPEAEKTDIVCDECGSMMLKKWGKNGWFLSCERYPKCKATRDLSD
ARGTAAVRETDISCDKCGKPMIIKTGRFGDFLSCTGYPACKNTRPVPLGVACPNCGGDLI
EIRPRKKGGRTFYGCSNWNAEQKCDFKLWQKPVPVPCPQCGAKFVTRTGGKKAMLVCATK
DCGFKQEIAEGEGEEGAADGSAPLDAAAIVASAAAAPADRPEPPEPAPADRPEAAPKGEA
EKPARAVRARRTAS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagggcgaggcgctcgccgtgacgccgccgggcgtcgtcaccgaccagaagttc
acgcagccgccgccccgctacaacgagggctcgctggtgcgcgagctggagaagcgcggc
atcggccgcccgtcgacgtacgccgagatcatcagcaaggtgcagcagcgcgcgtacgtg
gagaagcgcgagggcggcgcgttccagccgacgctgctcgggaagttcgtggtcgacggc
ctcgtccggtcgaacctcgacatcatggatccgaacttcaccgcgcagatggaggaggag
ctcgacgcggtcggcgccggcaacctgaagcgcgagcagctgctcaagcgcttctacaag
aagttccgggagcagctcgacaagtcgaagaagctcgcgccgtggaagcccgaggcggag
aagaccgacatcgtctgcgacgagtgcgggtcgatgatgctcaagaagtggggcaagaac
ggctggttcttgagctgcgagcgctacccgaagtgcaaggccacccgcgacctgtccgac
gcgcgcgggaccgccgccgtccgcgagaccgacatctcgtgcgacaagtgcgggaagccg
atgatcatcaagacggggcgcttcggcgacttcctgtcgtgcaccgggtacccggcctgc
aagaacacgcgcccggtgccgctcggcgtcgcgtgcccgaactgcgggggcgatctcatc
gagatccggccccgcaagaagggcgggcgcaccttctacggctgctcgaactggaacgcc
gagcagaagtgcgacttcaagctctggcagaagccggtgccggtcccgtgcccccagtgc
ggcgcgaagttcgtcacccgcaccggcggcaagaaggcgatgctcgtctgcgcgacaaag
gactgcgggttcaagcaggagatcgccgagggcgagggggaggagggcgccgcggacggg
tccgcccccctcgacgccgcggcgatcgtcgcgagcgccgcggcggcgccggccgatcgg
cccgagccgccggagcccgcgccggccgaccggcccgaggccgcgccgaagggggaagcc
gaaaagcccgcgcgggccgtgcgcgcacggcgcacggcgagctaa
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