Sorangium cellulosum So0157-2: SCE1572_34520
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Entry
SCE1572_34520 CDS
T02718
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu00040
Pentose and glucuronate interconversions
scu01100
Metabolic pathways
scu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SCE1572_34520
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCE1572_34520
Enzymes [BR:
scu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SCE1572_34520
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AGP39150
UniProt:
S4Y4L2
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All DBs
Position
9813578..9814972
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AA seq
464 aa
AA seq
DB search
MTNPDINWRESSLKSDQEIVRCLAETLGRPVGYGEKALGGFDPSGNSRLTVITTRSDVSV
EQQIYDAVTSDEHNWVVFDKDDFKSDRDIAMYRLKCGEPAVLAKLGATEQQCVNYQEWCS
AKGVPAAACEHQFFNVALNDASLPIRNVVIGSNTTIDGRMSRAAFRFSGFAIGRDSTGTP
TQTAESVILTHLSFKGAGHVEDHGLDPDMIRSTGASHDIWIHKNSFSFTGDSAFDVKVGA
HDITMSFNRVLDVKRATLHGSSDDHTIDAQITTTMHHNAFITSAPFYDEGRGTARRVPLL
RRGSSHMFNNVFMNYYKDFASVRVGGTLLFEDNVFLGGTPVQSEKSDRGAAFDEWTTKRL
SNNVVDDGNFTATGSFAWFSDDECVIDPTYEAAVPGGGGAARDLSQDYSEESRALIGMHK
LRAGQDLVDYVNATAGKDGAVPFNSPLSEGRDAILALPHEACIR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacccggacatcaactggcgcgagtcgtccttgaagagcgatcaggagatcgtt
cggtgcctggcggagaccctggggcggccggtggggtacggggaaaaagccctgggcggc
ttcgacccgagcggcaacagccgcctgacggtgatcaccacccgctccgatgtctcggtg
gagcagcagatctacgacgccgtcaccagcgacgagcacaactgggtggtgttcgacaag
gacgatttcaagagcgatcgcgacatcgccatgtaccgcctgaaatgcggcgagcccgcg
gtcctggccaagctgggcgccaccgagcagcagtgcgtcaattaccaggagtggtgcagc
gccaaaggcgtgccggcggccgcctgcgaacatcagttcttcaacgtcgccctgaacgac
gcgagcctgcccatccgcaacgtggtgatcggctccaacaccaccatcgatggtcgcatg
agccgcgcggcctttcgcttcagcggcttcgccatcggccgcgacagcaccggcacgccg
acccagaccgccgagagcgtgatcctcacccacctgagcttcaagggcgccggtcacgtg
gaagaccacggcctggacccggacatgatccgctccaccggcgcgtcccacgacatctgg
atccacaagaacagcttcagcttcaccggggattccgccttcgacgtgaaggtcggcgcc
cacgacatcaccatgtcgttcaaccgcgtcctcgacgtgaagcgggccaccctgcacggc
tccagcgacgaccacaccatcgacgctcagatcacgaccaccatgcaccacaacgcgttc
atcaccagcgcgccgttctacgacgaaggccgcggcacggcccggagggtgcccctgttg
cgccgcggctcctcgcacatgttcaacaacgtgttcatgaactactacaaggacttcgcc
agcgtgcgggtaggcggcaccctgctgttcgaagacaacgtctttctgggcggaaccccc
gtccagagtgagaagagcgatcggggcgccgccttcgacgagtggacgacgaagcggctc
tcgaacaacgtcgtggacgacggcaatttcaccgccaccggctcgttcgcctggttctcc
gatgacgagtgcgtcatcgacccgacctacgaagccgcggtcccgggcggcggcggcgcg
gcgcgggatctctcccaggattactcggaggaatcgcgcgcgctgatcggcatgcacaag
ctccgcgccggccaagacttggtggattacgtcaacgcgaccgcgggcaaagacggcgcc
gtgccgttcaactcgcctctctccgaggggcgcgacgccatcctcgcgctgccccacgag
gcctgcattcgctag
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