Sorangium cellulosum So0157-2: SCE1572_34750
Help
Entry
SCE1572_34750 CDS
T02718
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu00040
Pentose and glucuronate interconversions
scu01100
Metabolic pathways
scu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SCE1572_34750
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCE1572_34750
Enzymes [BR:
scu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SCE1572_34750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AGP39194
UniProt:
S4Y316
LinkDB
All DBs
Position
complement(9880740..9882077)
Genome browser
AA seq
445 aa
AA seq
DB search
MSAPASALPAFPGAEGFGAVATGGRGGRVIKVTNLRSSGAGSLQAALDASGPRIIVFDVS
GVIEGDVVVRNGDVTIAGQTAPGAGITVRGRLLSRYSNAVNNVIVRFLRVRPVHNGSAGE
QFDGAQFSLNSKLILDHVSIAWGVDETLDLYEADDVTVQWSTIESSATTGHPEGAHNYGL
INGPDGHRITLHHNLFAHHKARCPAVANGPADIRNNVAYNVRHGFVHHNRASGQFNIVGN
AYIKGPSDQLIPFYFDGSAGAGLKYFLADNTIDDPGKFTGVVNNPWQKPYLHPSFSRLNK
PESYRASSQFNFSRDVPGYIPVTTHRAEDAYRLVLAQAGALPHDVVTKGVLRNIERRDGA
WGARYVNNLMEGLTPGTAPADADRDGMADAWERARGLSSSNANDHSRVMPSGYTAIEEYI
NELAAALISTAESSVAFQGEEEETD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctccggcgagcgcgctcccggcgttccccggcgcagagggctttggcgccgtc
gcgaccggcgggcgcggcgggcgcgtcatcaaggtcaccaacctgcgatcgagcggggcg
gggagcctgcaggcggcgctcgacgcgagcgggccgcgcatcatcgtcttcgacgtgagc
ggcgtgatcgaaggggacgtcgtcgtccgcaatggagacgtgacgatcgccggccagacc
gcgccgggcgcgggcatcaccgtgcgcggacgcctgctctcgaggtactccaacgcggtc
aacaatgtcattgtaagattcttgcgagtccgccccgtgcacaacggctcggccggagag
cagttcgatggggcgcagttctccctgaactcgaagctgatcctcgatcacgtctcgatc
gcctggggcgtcgacgagaccctggatctctatgaggcggacgacgtcacggtccagtgg
tccaccatcgagtcgtcggcgaccacggggcatccagagggggcgcataattacggtctc
atcaacggccctgacggccatcggatcacgttgcatcacaacctgttcgcccatcacaag
gcgaggtgccccgcggtcgcgaacggccccgcggatatccgcaacaacgtggcctacaat
gtcagacacgggttcgtgcaccacaaccgggcgagcggccagttcaacatcgtgggcaac
gcgtacatcaaggggccgagcgatcagctgatccccttctatttcgacggcagcgccggc
gcggggctcaagtacttcctcgccgacaacaccatcgacgatcccggcaagttcacgggg
gtggtcaacaacccctggcagaagccgtacctccacccgagcttcagccggctcaacaag
cccgagtcgtaccgcgcctcgtcgcagttcaacttctcgcgcgacgtcccgggctacatc
cccgtgacgacgcaccgcgcggaggacgcctatcggctcgtcctcgcgcaggcgggcgcg
ctgccgcacgacgtcgtgacgaagggcgtcctccggaacatcgagcgccgcgacggcgcg
tggggcgctcgctacgtgaacaacctgatggaagggctcaccccggggacggcgcccgcc
gacgccgaccgcgacgggatggcggacgcgtgggagcgcgcgcgcggcctcagctcctcc
aacgcgaacgatcacagccgggtgatgccgtccggatacaccgcgatcgaggagtacatc
aacgagctggccgccgcgctgatcagcacggcagagtccagcgtggcgttccagggcgag
gaggaggagaccgactag
DBGET
integrated database retrieval system
