Sorangium cellulosum So0157-2: SCE1572_35695
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Entry
SCE1572_35695 CDS
T02718
Symbol
xylF
Name
(GenBank) xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCE1572_35695 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scu02000
]
SCE1572_35695 (xylF)
Transporters [BR:
scu02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
SCE1572_35695 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
phiKZ_gp29PR
HOOK
Motif
Other DBs
NCBI-ProteinID:
AGP39358
UniProt:
S4Y952
LinkDB
All DBs
Position
10119341..10120435
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AA seq
364 aa
AA seq
DB search
MAMISLAFSTGCSKPASEGETNAGKTDDKAPKTADAKGTDKKKITIGFSMDTLKEERWQR
DRDLFKAKAEQLGAQVLVQSANSDDALQNSQAENLLTQGVDVLVVVPHNAKTTATIVESA
HKQNVPVIAYDRLILDSDVDLYVSFDNVRVGELQAEALVKPAPKGNYVLIGGSPTDNNAK
LFREGQMNILKPLIDKGDIKVVADQWAKDWQPVEALKITENALTKNNNNVTAVVASNDGL
AGAAVQALGEQKLAGKVVVSGQDAELAACQRIAAGTQSMTVYKPIKSLAEKAAELAIKLA
KKEQIGEKTQTVNNGKKDVPSVLIAPIAVDKSNLASTVIADGFHKVEDVYKDLPKDQWPS
GATK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggccatgatctcgctcgcgttctcgaccggctgctcgaagccggcctccgagggcgag
acgaacgcgggcaagaccgatgacaaagccccgaagaccgcggacgccaagggtacggac
aagaagaagatcacgatcggcttctcgatggataccctgaaggaagagcggtggcagcgc
gaccgcgacctgttcaaggcgaaggccgagcagctcggggcgcaggtgctcgtgcagtcc
gcgaacagcgacgacgccctgcagaactcgcaggcggagaacctgctcacgcagggcgtc
gacgtgctcgtggtcgtgccccacaacgccaagacgaccgccaccatcgtcgagtcggcg
cacaagcagaacgtgcccgtcatcgcctacgaccggctgatcctcgactccgacgtcgac
ctctacgtgtccttcgacaacgtccgcgtgggcgagctccaggccgaggcgctcgtgaag
ccggccccgaaggggaactacgtcctcatcggcggctccccgaccgacaacaacgcgaag
ctcttccgcgaagggcagatgaacatcctgaagccgctcatcgacaagggcgacatcaag
gtcgtggcggaccagtgggccaaggactggcagccggtcgaggcgctcaagatcaccgag
aacgccctcaccaagaacaacaacaacgtcacggccgtcgtggcctcgaacgacggcctc
gcgggcgcggcggtccaggcgctcggcgagcagaagctcgccggcaaggtcgtcgtctcg
ggccaggacgccgagctcgccgcctgccagcggatcgcggccggcacccagagcatgacc
gtctacaagccgatcaagtccctcgccgagaaggccgccgagctcgccatcaagttggcg
aagaaggagcagatcggcgagaagacgcagacggtcaacaacgggaagaaggacgtcccg
agcgtgctgatcgcgccgatcgccgtggacaagagcaacctcgcctccacggtcatcgcc
gacgggttccacaaggtcgaggacgtctacaaggacctcccgaaggaccagtggccgtcg
ggcgccaccaagtag
DBGET
integrated database retrieval system
