Sorangium cellulosum So0157-2: SCE1572_37375
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Entry
SCE1572_37375 CDS
T02718
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCE1572_37375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scu03000
]
SCE1572_37375
03400 DNA repair and recombination proteins [BR:
scu03400
]
SCE1572_37375
Enzymes [BR:
scu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SCE1572_37375
Transcription factors [BR:
scu03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SCE1572_37375
DNA repair and recombination proteins [BR:
scu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCE1572_37375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AGP32743
UniProt:
S4XQ39
LinkDB
All DBs
Position
complement(10553746..10555260)
Genome browser
AA seq
504 aa
AA seq
DB search
MRLDEEACYRALETRDRRFDGRFFTGVLSTGIYCRPICPARTPKRERCVFFPSAAAAQEA
GYRPCLRCRPEASPGTPAWLGTSALVSRALRLIAEGALDDADAPALAARLGVGERHLRRL
FLRHVGASPLAVAQTRRLLFAKKLLDETALSMTEVALSSGFSSVRRFNDAIRATYARTPR
ELRTAAAKRGGGAAGGAPDIALRLPFRPPLDWGALAGFLGARAIPGVESADPGAYRRAVR
VAGGHGVVEVRPSPGEPHLLARLRLPGTEGLIHCAERLRRLFDLGADPDAIAAHLRADPR
LGPLVAATPGVRVPGAWDGFELAVRAILGQQVSVRAATQLAGRLVARHGEPLAVRGGLPE
GAEGLRFVFPSPEALAAADLADLGLPRARAATITALAARVARGEVALDASRGLDETVRAL
CAVPGIGAWTAHYIAMRALREPDAFPATDLGLRRALGGVSGADLLAMAEAWRPWRAYAAM
LLWTADAQGARPAEREVSDGSLAG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgacgaggaggcttgctatcgcgcgctcgagacccgcgaccgtcgcttcgac
ggtcgcttcttcacgggcgtgctgtcgacgggcatctactgccgcccgatctgcccggcg
cggacgccgaagcgggagcggtgcgtcttcttcccctcggcggcggccgcgcaggaggcc
ggctaccgcccgtgcctgcgctgccgccccgaggcgtcgcccgggacgcccgcgtggctg
ggcacgtcggcgctcgtctcgcgggcgctccggctcatcgcggagggcgcgctggacgac
gcggacgccccggcgctcgcggcgcggctcggcgtcggcgagcgccacctccggcggctc
ttcctgcggcacgtcggcgcctccccgctcgccgtggcgcagacgcggcgcctgctcttc
gcgaagaagctcctcgacgagacggcgctctcgatgaccgaggtggcgctctcgtcgggg
ttctcgagcgtccgccgcttcaacgacgcgatccgcgccacctacgcgcgcacgccgcgc
gagctgcggacggccgccgcgaagcggggcgggggagcggcgggcggcgcgccggacatc
gcgctccgcctcccgttccgcccgccgctcgactggggcgcgctcgcgggcttcctcggg
gcgcgcgcgatccccggcgtggagtcggcggaccccggcgcgtaccgccgcgcggtgcgc
gtggccggcgggcacggcgtcgtcgaggtgcgcccttcgcccggcgagcctcacctcctc
gcgcggctgcggctgcccggcaccgaggggctcatccactgcgcggagcgcctgcggcgg
ctgttcgacctcggcgccgatcccgacgccatcgccgcgcacctccgggccgacccgcgg
ctcggccccctggtcgcggcgacgccgggcgtgcgcgtgccgggcgcgtgggacggcttc
gagctcgcggtgcgggcgatcctgggccagcaggtgagcgtccgcgccgcgacgcagctc
gcgggccgcctcgtcgcgcggcacggcgagccgctcgcggtgcgcggcggcctgcccgag
ggggccgaggggctccgcttcgtctttccgtcgcccgaggcgctcgccgcggccgatctg
gcggatctcggcctgccgcgcgcgcgcgccgcgacgatcaccgcgctcgcggcgcgcgtg
gcccgcggcgaggtcgcgctcgacgcctcgcgcggcctggacgagaccgtgcgcgcgctc
tgcgcggtgccgggcatcggcgcgtggaccgcgcactacatcgcgatgcgggcgctgcgc
gagccggacgcgttcccggccacggatctcggcctgcggcgcgcgctcggcggcgtctcc
ggcgcggatctcctggcgatggcggaggcgtggcggccgtggcgcgcctacgcggcgatg
ctcttgtggacggcggacgcgcagggagcgcggcccgcggagagggaggtgtcggatgga
tctcttgctggatga
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