Sorangium cellulosum So0157-2: SCE1572_39085
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Entry
SCE1572_39085 CDS
T02718
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu00260
Glycine, serine and threonine metabolism
scu00460
Cyanoamino acid metabolism
scu00630
Glyoxylate and dicarboxylate metabolism
scu00670
One carbon pool by folate
scu00680
Methane metabolism
scu01100
Metabolic pathways
scu01110
Biosynthesis of secondary metabolites
scu01120
Microbial metabolism in diverse environments
scu01200
Carbon metabolism
scu01230
Biosynthesis of amino acids
scu01240
Biosynthesis of cofactors
scu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SCE1572_39085
09102 Energy metabolism
00680 Methane metabolism
SCE1572_39085
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SCE1572_39085
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SCE1572_39085
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SCE1572_39085
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SCE1572_39085
Enzymes [BR:
scu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SCE1572_39085
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-ProteinID:
AGP32771
UniProt:
S4XJT5
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All DBs
Position
11056222..11057493
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AA seq
423 aa
AA seq
DB search
MSVKNDVQGLRPLSEVDPEIAELIRLEERREADTLRLIASENYVSRAVLEATGSVLTNKY
SEGYPHKRYYEGQQQIDVVEELARTRVAKLFGADHVNVQPYSGSPANLAVYLAFAQANDT
IMGLGLPAGGHLTHGWSVSITGKYFKSVPYGVRESDHRIDLDQVRDLARAHRPKLIWCGT
TAYPRTIDFAAFRSIADEVGAILAADIAHIAGLVAGGAHPSPVGIADVVTSTTHKTFRGP
RGAMILCKKEHASAIDKAVFPGLQGGPHNHTTAAIAVAAKEASEDGFRAYAKQIVQNAQA
LGRALESRGFRLITGGTDNHLLLIDMTPKGIGGKPYAQALDRAGIVANYNSIPFDPRKPF
DPSGLRIGTPAVTSRGMGVAEMERLAAWMDDVAQNVNDEARIARIAAEVAELCRGFPAPG
IRV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaagaacgacgtgcagggcctgcggccgctgagcgaggtcgaccccgagatc
gccgagctgatccgcctggaggagcgccgcgaggcggacacgctccggctgatcgccagc
gagaactacgtgtctcgggcggtgctcgaggcgaccggctcggtgctgacgaacaagtac
tccgagggctacccgcacaagcggtattacgagggccagcagcagatcgacgtggtcgag
gagctcgcgcgcacgcgggtggccaagctgttcggggccgaccacgtgaacgtgcagccc
tactccgggagcccggccaacctcgccgtctacctcgcgttcgcgcaggcgaacgacacg
atcatgggcctcggcctgcccgcgggcgggcacctgacccacggctggtcggtgagcatc
acggggaagtacttcaagagcgtcccgtacggggtgcgcgagagcgatcaccgcatcgac
ctggaccaggtgcgcgacctggcgcgcgcccaccggccgaagctcatctggtgcgggacg
acggcctacccgcgcacgatcgacttcgccgcgttccggtcgatcgccgacgaggtcggg
gcgatcctggcggcggacatcgcgcacatcgcggggctcgtggccggcggggcgcacccg
tcgccggtgggcatcgccgacgtggtgacgtcgacgacgcacaagacgttccggggcccg
cgcggcgcgatgatcctctgcaagaaggagcacgcgagcgcgatcgacaaggcggtgttc
ccgggcctccagggcgggccgcacaaccacacgaccgcggccatcgcggtcgcggcgaag
gaggcctcggaggacgggttccgggcctacgcgaagcagatcgtgcagaacgcgcaggcg
ctcgggcgcgcgctggagtcgcgcggcttccggctcatcaccggcgggaccgacaaccac
ctcctgctcatcgacatgaccccgaagggcatcggcgggaagccctacgcgcaggcgctc
gatcgcgcgggcatcgtggccaactacaactcgatcccgttcgacccgcgcaagccgttc
gatccgtcggggctccgcatcggcacgccggcggtgacgtcgcgcggcatgggcgtcgcc
gagatggagcgcctggcggcgtggatggatgacgtggcgcagaacgtcaacgacgaggcg
cgcatcgcgcgcatcgccgccgaggtcgcggagctctgccgcggcttcccggcgcccggg
atccgcgtctaa
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