Sorangium cellulosum So0157-2: SCE1572_41225
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Entry
SCE1572_41225 CDS
T02718
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCE1572_41225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scu03400
]
SCE1572_41225
Enzymes [BR:
scu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCE1572_41225
DNA repair and recombination proteins [BR:
scu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCE1572_41225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Helicase_C
ResIII
Zn_ribbon_PriA
Motif
Other DBs
NCBI-ProteinID:
AGP40367
UniProt:
S4Y4M2
LinkDB
All DBs
Position
complement(11616472..11618946)
Genome browser
AA seq
824 aa
AA seq
DB search
MPLLADVAVPVPLSQAFTYEVPAALAGEVRPGARVLCEFHRRKLLGVVLAVSERSAAIDP
SKIKPLAALVDARPALPAELLSFLQELAGYYFAPIGEVLRLALPAIEREQVRALKAQGEL
DGMLDLGRAKQVGGRKVAYATATDVVEEPGTLRGQAAAVLALLRANGEQPVARLEERYGN
ARSALKKLAERGLVALDEREPPRDPFFRLPEERDVPPELNPAQAEAAARIDAALEALSAP
ERAALSAPGKAAPSAPGDAEARGAAPREARPAGPSAFLLFGVTGSGKTEVYLRAIKSCLD
RGRGALVMVPEIALTPQLVARFRARFGDELAVLHSGLSDADRHAMWASLHGGKVRVAIGA
RSALFAPVPDLGLILVDEEHDGSFKQEEGVRYHARDMALLRAHRAGAVCVLGSATPSIES
VALVRRGKLAELRLPERAHREASLPEVTLVDLRRFGAGPSGDPLISLPLHRALERTLAAK
EQAILFLNRRGFAPSVVCGSCGNLTTCSACSVALTYHRGRRRDARPQAPAGAPAPGAPGP
AAPIDERPQGGLLRCHYCDYAGPLPERCASCGSRTLLLEGLGTERLEATIAASFPEARVA
RLDRDVAGKDRSQAILARMREGKIDILVGTQMVTKGHDLPNVTLVGVVNADAALGLPDFR
AAERGFQLLVQVAGRAGRRDRPGRVLIQTRNPEHPAIAFAAAHDVPGFLEREIRDREEVG
YPPATRLALIRIDAVDEGVGRGAAAKLAAHARTCPDGLARRVEVLGPSAAPIARLRGRYR
FRVLLRARERGPLRGTLAALTGLMRDGIDRNARVIIDVDPVAML
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcctcgccgacgtcgcggtgcccgtcccgctctcgcaggccttcacctacgag
gtgccggccgcgctcgccggcgaggtgcggccgggggcgcgcgtgctctgcgagttccac
cggcgcaagctgctcggcgtcgtgctcgccgtcagcgagcgcagcgcggccatcgacccg
tccaagatcaagccgctcgcggccctcgtcgacgcgcgcccggccctgccggcggagctg
ctctcgttcctgcaggagctcgccgggtactacttcgcgccgatcggggaggtgctccgc
ctcgcgctgccggcgatcgagcgcgagcaggtgcgggcgctcaaggcgcagggcgagctc
gacggcatgctcgatctcggccgggccaagcaggtgggcggccgcaaggtggcgtacgcc
acggcgacggacgtggtcgaggagccgggcacgctccgcgggcaggccgccgcggtgctc
gcgctgctccgggcgaacggcgagcagccggtcgcgcggctcgaggagcgctacggcaac
gcgcgcagcgccctgaagaagctcgccgagcggggcctcgtcgccctcgacgagcgcgag
ccgccgcgcgacccgttcttccgcctccccgaggagcgcgacgtgccccccgagctgaac
ccggcgcaggccgaggccgcggcgcggatcgacgcggcgctcgaggcgctgtcggcgccc
gaaagagcggcgctgtccgcgcccggaaaggcggcgccgtccgcgcccggagacgcggag
gcgcgcggggccgccccgcgcgaggcgcggcccgccgggccgagcgcgttcctcctcttc
ggcgtgaccggctccggcaagaccgaggtgtacctgcgcgccatcaagagctgcctcgac
cgcggccgcggcgcgctcgtgatggtgccggagatcgccctcaccccgcagctcgtcgcc
cgcttccgcgcccgcttcggcgacgagctcgccgtgctgcacagcgggctgagcgacgcc
gaccgccacgcgatgtgggcgagcctccatggcggcaaggtgcgcgtcgccatcggggcg
cgctccgccctgttcgcgcccgtgccggatctcggcctcatcctcgtcgacgaggagcac
gacggctcgttcaagcaggaggagggcgtgcgctaccacgcgcgcgacatggcgctgctc
cgcgcccaccgcgccggggcggtgtgcgtgctcggctccgcgacgccctccatcgagtcg
gtcgcgctggtgcgccgcggcaagctcgccgagctgcgcctgccggagcgcgcgcaccgc
gaggccagcctccccgaggtcaccttggtcgatctccgccgcttcggcgccggcccctcg
ggcgacccgctgatctcgctgccgctgcaccgcgcgctcgagcggacgctcgcggcgaag
gagcaggcgatcctgttcctgaaccgccgcggcttcgcgccgagcgtcgtctgcggctcg
tgcgggaacctgacgacgtgctcggcgtgctcggtcgcgctgacctaccaccgcgggcgg
cgccgcgacgcgcgcccgcaggcgccggcgggcgcgcccgcgccgggcgcgccggggccg
gcggcgccgatcgacgagcggccgcagggcgggctcctgcgctgccattactgcgactac
gcggggccgctgccggagcgctgcgcgtcgtgcggctcgcgcaccctgctgctcgagggc
ctcggcaccgagcggctcgaggccacgatcgccgcctcgttcccggaggcgcgcgtggcg
cgcctcgaccgcgacgtcgcgggcaaggaccgctcgcaggcgatcctcgcgaggatgcgc
gagggcaagatcgacatcctggtcggcacgcagatggtcacgaagggccacgatctgccc
aacgtgaccctggtcggcgtggtgaacgccgacgccgcgctggggctgccggatttccgg
gcggccgagcgcggcttccagctgctcgtgcaggtggccgggcgcgccgggcggcgcgac
cgcccgggccgggtgctcatccagacgcgcaaccccgagcacccggcgatcgcgttcgcc
gcggcgcacgacgtgccgggcttcctcgagcgggagatccgcgaccgcgaggaggtgggc
tacccgccggccacgcgcctcgcgctgatccggatcgacgcggtcgacgagggcgtgggc
cgcggcgccgcggcgaagctcgcggcccacgcgcgcacgtgtccggacgggctcgcgcgg
cgcgtcgaggtgctcgggccgtcggcggcgccgatcgcgcggctgcgcgggcggtaccgg
ttccgggtgctcctccgggcgcgcgagcgcgggccgctccgggggacgctcgcggcgctc
accgggctgatgcgggacgggatcgaccggaacgcgcgggtgatcatcgacgtggatccg
gtcgcgatgctgtga
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