Sorangium cellulosum So0157-2: SCE1572_42295
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Entry
SCE1572_42295 CDS
T02718
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCE1572_42295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scu03021
]
SCE1572_42295
03400 DNA repair and recombination proteins [BR:
scu03400
]
SCE1572_42295
Enzymes [BR:
scu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCE1572_42295
Transcription machinery [BR:
scu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCE1572_42295
DNA repair and recombination proteins [BR:
scu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCE1572_42295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AGP40559
UniProt:
S4Y6U7
LinkDB
All DBs
Position
complement(11915989..11916216)
Genome browser
AA seq
75 aa
AA seq
DB search
MEDCLEREENRFALVVLAANRTRQLMKGVDALVKTKNKPAVTSLREIAAGKVHFHRSSHE
VVSEWLQQMNAGGQR
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
gtggaagactgcctcgagcgcgaggaaaaccgtttcgctctcgtcgtgcttgcggccaac
cggacgcggcagctcatgaagggcgtggatgccctcgtgaagacgaagaacaagcctgcc
gtgaccagccttcgggagatcgcggcgggcaaggtgcacttccaccggagctcgcacgag
gtcgtgtccgagtggctccagcagatgaacgctggcggccagcgctga
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