Sorangium cellulosum So0157-2: SCE1572_45500
Help
Entry
SCE1572_45500 CDS
T02718
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCE1572_45500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scu03400
]
SCE1572_45500
Enzymes [BR:
scu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SCE1572_45500
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SCE1572_45500
DNA repair and recombination proteins [BR:
scu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCE1572_45500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DprA_WH
LPAM_MltD
Zn_ribbon_TFIIB
Lar_restr_allev
DZR
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AGP41129
UniProt:
S4Y8C6
LinkDB
All DBs
Position
complement(12811057..12811923)
Genome browser
AA seq
288 aa
AA seq
DB search
MPELPEVEHAAASLRLFLAGDRIASAEGDRTRLFRGSSRDAFERDLPGRALERLTRFGKY
LALELDAGVVLLSHLGMTGKWVRRSAGEPAPAHSRARLLLASGSVLHYSDPRLLGRLAVL
RGVSPGEIPEIAALGPDPLRDGIDVDALARRARASARAVKAILMDQAVIAGLGNIQATEA
LFRAGVHPARPGRSLSREEVAAIAAGALGSIAHTLRAIGGGEIAYLSESGATPNPFLVYA
RAGEPCPRCGAALETRAIGGRSSAFCPRCQPERGRARARAGPRRAPRR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagctccccgaggtcgagcacgccgccgcctcgctgcgcctcttcctggcgggc
gaccggatcgcgtccgccgagggcgaccgcacccgcctgttccgcggatcgagccgcgac
gctttcgagcgcgatctcccgggccgcgcgctcgagcgcctcacgcgcttcggcaagtac
ctcgcgctcgagctcgacgccggcgtggtgctgctcagccacctcgggatgaccggcaaa
tgggtgcgccgctcggcgggcgagcccgcgccggcgcacagccgcgcccggctgctgctc
gcttcggggagcgtgctccactacagcgatccgcggctcctcggccgcctcgcggtgctg
cgcggcgtctcgccgggcgagatccccgagatcgccgcgctgggcccggatccgctgcgc
gacgggatcgacgtggacgccctggcgcggcgcgcgcgggcgagcgcgcgcgccgtgaag
gcgatcctcatggaccaggcggtgatcgccggcctcggcaacatccaggcgaccgaggcg
ctcttccgggccggcgtgcacccggcgcggccgggccgatccctctcgcgcgaggaggtg
gccgcgatcgccgccggcgccctgggctcgatcgcgcacacgctccgggcgatcggcggc
ggggagatcgcctacctgtccgagtccggcgcgacgccgaacccgttccttgtctacgcg
cgcgccggcgagccgtgcccccgctgcggcgcggcgctggagacgcgcgcgatcggcggt
cgctccagcgccttctgcccgcgctgccagccggagcgcggccgcgcgcgggcgcgagct
gggccgcgcagggcgccccggcgctga
DBGET
integrated database retrieval system
