Sorangium cellulosum So0157-2: SCE1572_46765
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Entry
SCE1572_46765 CDS
T02718
Name
(GenBank) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
scu
Sorangium cellulosum So0157-2
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scu03016
]
SCE1572_46765
Enzymes [BR:
scu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SCE1572_46765
Transfer RNA biogenesis [BR:
scu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCE1572_46765
Prokaryotic type
SCE1572_46765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AGP41341
UniProt:
S4YAK6
LinkDB
All DBs
Position
13136095..13137048
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AA seq
317 aa
AA seq
DB search
MARSAASTRGILLSVAYDGRPFAGYARQRDQRTVAGELLGALRAIDPAIREIRGASRTDA
GVHARDQRVAFDTAAPLPPRGWVLATARHLPDEIVIRRAAVVRVGYSPRFESLRKRYRYL
ILRDLVRDPFLSRRAWRVEGLTDDAIERARAEALAAKGTHDFAAFRTSADERTTTVRTLY
GIELSLDPADPRLVRIDVEGNAFLHNMVRILVGTLMDVARGHLAPGAIARALASRDRRDA
GITAPPDGLYLEHIHLRDDGQDPWPSGPSNGSSADDAAPEGAPAADDAAPADDAAPADDA
APAADDAGAGPEAGAGA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaggagcgccgcttccacgcgggggatcctgctctcggtcgcctacgacgggcgc
ccgttcgcgggctacgcccgtcagcgcgaccagcgcacggtcgcgggcgagctgctcggc
gcgctgcgcgccatcgatccggccatccgcgagatccgcggcgcgagccgcaccgacgcg
ggcgtccacgcgcgcgaccagcgcgtcgccttcgacacggcggcgccgctgccgccgcgc
ggctgggtcctcgcgaccgcgcgccacctgcccgatgagatcgtgatccgtcgcgccgcc
gtcgtgcgcgtcgggtactcgccccgcttcgagagcctccgcaagcgctaccgctacctg
atcctccgggatctggtccgcgatccgttcctcagccggcgcgcgtggcgggtcgagggc
ctcacggacgacgcgatcgagcgggcgcgcgccgaggcgctcgccgcgaagggcacccac
gacttcgcggcgttccggacgagcgcggacgagcggacgaccacggtgcgcacgctgtac
ggcatcgagctgtcgctcgaccctgcggatccgcgcctcgtccggatcgacgtcgagggg
aacgcgttcctgcacaacatggtgcgcatcctggtcggcaccttgatggatgtggcgcgc
ggccacctcgcccccggcgcgatcgcccgcgcgctcgcgtcgcgcgaccggcgcgacgcg
gggatcacggcgccgccggacgggctctacctggagcacatccacctgcgcgacgacggc
caggatccctggcccagcgggccgtcgaacggatcctcggcggacgacgccgcgccggag
ggcgccccggcggcggacgacgccgcgccggcggacgacgccgcgccggcggacgacgcc
gcgccggcagcggacgacgcgggcgcggggcccgaagcgggcgccggggcctag
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