Sorangium cellulosum So0157-2: SCE1572_49780
Help
Entry
SCE1572_49780 CDS
T02718
Name
(GenBank) hypothetical protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu03030
DNA replication
scu03410
Base excision repair
scu03420
Nucleotide excision repair
scu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCE1572_49780
03410 Base excision repair
SCE1572_49780
03420 Nucleotide excision repair
SCE1572_49780
03440 Homologous recombination
SCE1572_49780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scu03032
]
SCE1572_49780
03400 DNA repair and recombination proteins [BR:
scu03400
]
SCE1572_49780
Enzymes [BR:
scu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCE1572_49780
DNA replication proteins [BR:
scu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SCE1572_49780
DNA repair and recombination proteins [BR:
scu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SCE1572_49780
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCE1572_49780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AGP41885
UniProt:
S4YBZ5
LinkDB
All DBs
Position
13979355..13982057
Genome browser
AA seq
900 aa
AA seq
DB search
MSTRPTALPPAGAPDVLYLIDLSGYVFRAYHAISPLSSPSGEPTHATYGTVAMLSKLVDE
RKPAYLGVAMDSPGKTFRDDLDPRYKAHRPPPPPDLGVQMNRCREIVEAYRIPIFIQEGL
EADDLVAVAVERAKERGLRVVIASSDKDLMQLVDGERVMLWDAMRDKVYGHPEVVAKFGV
PPEQVRDLLALVGDSSDNVPGVPGVGLKTAAELLAQFGSLSAIYARLDEVKKPRIRESLK
QHEADALLSQKLVTLDGSAPVSLDLETLRYGGADTGRLRELFTELGFSRFLKAVRAPEPT
ARASTYRVVATREELEAFAKSARAAGRLAIDVHATSREPMSAHVCGVALACEPGQAVYVP
LGHRYLGAPAQLSMGDVDAVLGPLLADPELPKVGHDVKFCEVVLLRHRIGLVGVAFDTML
ASYLLDPEGKNQLHELAERELGAKMQTLDEVAPKRRGQAQRGLDEIELGEATTYGAAFAD
VALSLTDRLRPRLRAERLEDLLVQIELPLSAVLAEMELTGVLVDPQALAQLGAQMTTELA
ALEQRAREMVGHDINLASPKQLEAVLFDELKLRSQRKTKTGRSTDADVLETLAEDHPFPG
VVLEHRVIAKLKGTYVDALPRLVHPTTGRIHTRWSQAVAATGRLSSQDPNLQNIPIRTEL
GRMIRRAFVAPPGSVIVSADYSQIELRVLAHLSKDPVLVDAFRTGQDVHVRTAMEIFGVD
EAGVTDEMRRRSKTINFGVIYGMGEAALAKRLDISRAEAARFIDAYFARYRGVHEFMERT
MAEAKRSESVRTLLGRRRLLPDLRSSDRMRRAQAERIAQNTPIQGTAADLLKLAMVRIPR
PVVPGARMVLTVHDELAFEVPIEAVDEAKAKVREAMESVFPLDVPLLVDIGHGPTWAEAH
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcgccctaccgcgcttcccccggccggagctccggacgtcctctacctgatc
gacctctcgggctacgtcttccgcgcctaccacgcgatcagcccgctctcgagcccgagc
ggcgagccgacgcacgcgacgtacggcaccgtcgcgatgctctcgaagctcgtggacgag
cggaagcccgcgtacctcggcgtggcgatggactctccgggcaagacgttccgcgacgat
ctcgacccacgctacaaggcccaccggccgccgccgccgcccgacctcggtgtgcagatg
aaccggtgccgggagatcgtcgaggcgtaccgcatcccgatcttcatccaggaggggctc
gaggcggacgacctcgtggccgtcgccgtcgagcgggccaaggagcgggggctgcgcgtg
gtcatcgcgtcgagcgacaaggatctcatgcagctcgtcgacggcgagcgggtgatgctc
tgggacgcgatgcgcgacaaggtctacgggcaccccgaggtcgtcgcgaagttcggcgtg
cctccggagcaggtgcgcgacctgctcgccctcgtcggcgacagctcggacaacgtcccc
ggcgtccctggcgtgggcctgaagacggccgccgagctgctcgcgcagttcggctcgctc
tcggcgatctacgcccgcctcgacgaggtgaagaagcctcgcatccgcgagtcgctcaag
cagcacgaggccgacgcgctcctgtcgcagaagctcgtgacgctcgacggcagcgccccc
gtctcgctcgacctggagacgctgcgctacggcggcgcggacaccgggaggctccgggag
ctcttcaccgagctcgggttctcgcgcttcctgaaggccgtccgcgcgcccgagcccacg
gcgcgcgcgtcgacctaccgggtcgtcgcgacgcgcgaggagctcgaggccttcgccaaa
tcggcgcgcgcggccgggcgcctcgccatcgacgtgcacgcgacgagccgcgagccgatg
agcgcccacgtctgcggcgtcgcgctcgcctgcgagccggggcaggccgtctacgtcccc
ctgggccaccgctacctcggcgcgccggcccagctctcgatgggcgacgtcgacgcggtg
ctcggcccgctgctcgccgaccccgagctcccgaaggtcggccacgacgtgaagttctgc
gaggtggtcctcctgcggcaccgcatcgggctcgtcggcgtcgcgttcgacacgatgctg
gcgagctacctgctcgatcccgaggggaagaaccagctccacgagctcgccgagcgcgag
ctcggcgccaagatgcagaccctcgacgaggtggccccgaagcgccgcgggcaggcgcag
cgcggcctcgacgagatcgagctcggcgaggccacgacttacggggcggcgttcgccgac
gtcgcgctctcgctcaccgaccggctgcgcccgcggctccgcgccgagcggctcgaggat
ctgctcgtgcagatcgagctgcccctctccgcggtgctcgcggagatggagctcacgggc
gtcctcgtcgacccgcaggcgctcgcgcagctcggcgcgcagatgacgaccgagctcgcg
gcgctggagcagagggcgcgcgagatggtggggcacgacatcaacctggcgtcgccgaag
cagctcgaggccgtcctgttcgacgagctcaagctgcgctcccagcgcaagacgaagacc
ggccgctcgaccgacgccgacgtgctggagacgctggcggaggaccacccgttccccggc
gtggtgctcgagcaccgcgtcatcgccaagctcaagggcacgtacgtggacgcgctgccg
cgcctcgtgcacccgaccaccggccggatccacacgcgctggagccaggccgtggccgcg
acggggcggctctcgtcgcaggatccgaacctgcagaacatcccgatccgcacggagctc
gggcggatgatccggcgcgcgttcgtcgcgccgcccgggagcgtgatcgtgagcgccgac
tactcccagatcgagctgcgcgtcctcgcccacctgtcgaaggatccggtgctcgtcgac
gcgttccgcaccgggcaggacgtgcacgtgcgcacggccatggagatcttcggcgtggac
gaggcgggggtcaccgacgagatgcggcgccgcagcaagacgatcaacttcggcgtgatc
tacgggatgggcgaggcggcgctcgcgaagcgcctcgacatctcgcgcgcggaggcggcg
cgcttcatcgacgcctacttcgcgcgctaccgcggcgtgcacgagttcatggagcggacg
atggccgaggcgaagcgctccgagtcggtgcgcacgctgctcggccggcgcaggctgctc
ccggacctgcgcagcagcgaccggatgcgccgcgcacaggcggagcgcatcgcccagaac
acccccatccaggggacggcggcggatctcttgaagctcgcgatggtgcgcatcccgcgc
cccgtcgtccccggcgcgcgcatggtgctcacggtgcacgacgagctcgcgttcgaggtg
ccgatcgaggcggtggacgaggcgaaggcgaaggtgcgggaggccatggagtcggtcttc
ccgctcgacgtgccgctcctcgtcgacatcggccacggcccaacatgggccgaggctcat
tga
DBGET
integrated database retrieval system
