Sorangium cellulosum So0157-2: SCE1572_51435
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Entry
SCE1572_51435 CDS
T02718
Name
(GenBank) hypothetical protein
KO
K03089
RNA polymerase sigma-32 factor
Organism
scu
Sorangium cellulosum So0157-2
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scu03021
]
SCE1572_51435
Transcription machinery [BR:
scu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCE1572_51435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
GntR
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AGP42190
UniProt:
S4YCQ2
LinkDB
All DBs
Position
14425084..14426379
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AA seq
431 aa
AA seq
DB search
MAKSKSEPRTKRTKGTGAPQPAGAAEAGPLPGPEDEGADPSAGTDEVADAAPRPAAKRRA
RSAAKNAGGARAEAQPAASDDDGARDDEDEGDAPPESGAAPAGDVDEGDVVEVVGEVIED
ASLDVNDIELPRSARAGAAGGGRGGDAALSRTDPLQAYLREVQRHPLLTADEEKELTIKY
SKTQDVATAARLVTANLRLVVKLAYEYRRAYKNIMDLIQEGNIGLMQAVKRYDPYRGVKL
SSYAAWWIRAYILRFILNNWRLVKLGTTQAQRKLFFNLNKEKAKLSAMGIEPTAAEIAKR
LSVEEKEVVDMDRRLASGEASLDAPVGDLEGRTIPRVELLVSSGASPDSAFEASEMGMLV
HDRLSKFRETLKGKDVIIFDKRMAAEDPLTLQELGNEFGISRERVRQLEARLQSKLRTYL
QEELGDAVEAD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagagcaagagcgagccgcgaacgaagcgaacgaaggggaccggtgcgccgcag
ccggcgggggcggcggaggcgggcccgctgcccgggccggaggacgaaggcgcggacccg
agcgcgggcacggacgaggtcgcggacgcggccccccggcccgccgcgaagcgccgcgcg
cgctccgcggcgaagaacgccggcggcgcgcgcgccgaggcgcagcccgcggccagcgac
gacgacggcgcgcgcgacgacgaggacgagggggacgccccgcccgagagcggcgccgcg
ccggccggcgacgtcgacgagggggacgtcgtggaggtcgtcggcgaggtcatcgaagac
gcgagcctcgacgtgaacgacatcgagctcccgcgctccgcgcgcgccggcgccgccggc
ggggggcgcggcggcgacgcggcgctgtcgcgcacggacccgctccaggcctacctgcgc
gaggtgcagcgccacccgctgctcacggcggacgaggagaaggagctgacgatcaagtac
tcgaagacgcaggacgtcgcgaccgccgcgcggctcgtgacggcgaacctgcggctcgtg
gtcaagctcgcgtacgagtaccggcgcgcctacaagaacatcatggacctcatccaggag
gggaacatcggcctgatgcaggccgtgaagcgctacgacccgtaccgcggcgtgaagctc
tcctcgtacgcggcgtggtggatccgcgcgtacatcctgcgcttcatcctcaacaactgg
cgcctcgtgaagctcggcacgacgcaggcgcagcggaagctcttcttcaacctcaacaag
gagaaggcgaagctctcggcgatgggcatcgagccgacggcggcggagatcgcgaagcgc
ctctcggtcgaggagaaggaggtggtcgacatggaccgccgcctcgcgagcggcgaggcg
tcgctcgacgccccggtcggcgatctcgagggccggacgatcccgcgcgtcgagctgctc
gtctcgtcgggggcgagcccggacagcgcgttcgaggcgagcgagatggggatgctcgtc
cacgaccggctctcgaagttccgcgagacgctgaagggcaaggacgtgatcatcttcgac
aagcgcatggccgcggaggatccgctcacgctccaggagctcggcaacgagttcggcatc
tcgcgcgagcgcgtgcgccagctcgaggcgcggctccagtcgaagctgcggacgtacctg
caagaggagctcggcgacgccgtcgaagcggactag
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