Streptomyces cyaneogriseus: TU94_02025
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Entry
TU94_02025 CDS
T03687
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
scw
Streptomyces cyaneogriseus
Brite
KEGG Orthology (KO) [BR:
scw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scw03021
]
TU94_02025
Transcription machinery [BR:
scw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TU94_02025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_Crp_2
MarR
HTH_27
Sigma70_ECF
GerE
MarR_2
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AJP00487
UniProt:
A0A0C5FLC2
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All DBs
Position
468073..468972
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AA seq
299 aa
AA seq
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METVDTVVTRSEAPAVEETTRSGATDDGLLTEVVDPRAVAPRDARELSRHFFQRLTELEE
GTHEYQYARNTLIEMNMSLVRFAAGRFRGRGDDMEDIVQTGMIGLIKAIDRFELSREVEF
TSFALPYIVGEIKRFFRDTTWAVHVPRRLQELRVELAKAREELSSRLDREPTVAELATLM
NISEDQVIEGQIAANGYNSASLDAALTGDGPEGGEAVLADFIGVEEEGMRLVEDFHSLAP
LMAELSERDRRIIHMRFVEEATQAEIGEQLGCSQMHVSRLIKRIIARLREGMLGELGCA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgtcgacaccgttgtgacccggtcggaggcaccggccgtcgaggagaccacc
agaagtggggcgacggacgacggactgctgacggaggtcgtggacccgcgggccgtggcg
ccgcgcgacgcacgggagctgtcccgtcatttcttccagcgcctgacggagctcgaagag
ggaacgcacgaataccagtacgcgcgcaacacgctcatcgagatgaacatgtcgctcgtg
cggttcgccgccggccggttccgcggccgcggggacgacatggaggacatcgtccagacc
ggcatgatcggcctgatcaaggcgatcgaccggttcgagctctcgcgcgaggtcgagttc
acctccttcgcgctgccgtacatcgtcggcgagatcaagcggttcttccgcgacacgacg
tgggccgtgcacgtgccccggcggctgcaggagctgcgggtggagctggccaaggcgcgc
gaggagctctccagccgcctggaccgcgagcccaccgtcgccgagctcgccaccctgatg
aacatcagcgaggaccaggtgatcgagggccagatcgccgccaacgggtacaactccgcg
tccctggacgccgcgctcaccggcgacggcccggagggcggcgaggcggtgctcgccgac
ttcatcggtgtcgaggaggaggggatgcggctcgtcgaggacttccactcgctggcaccg
ctcatggccgagctcagcgagcgcgaccggcggatcatccacatgaggttcgtcgaggag
gccacgcaggccgagatcggagagcagctcggctgctcccagatgcacgtctcccggctg
atcaagcggatcatcgcccggctgcgcgagggcatgctgggtgagctcggctgcgcctga
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