Streptomyces cyaneogriseus: TU94_08900
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Entry
TU94_08900 CDS
T03687
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scw
Streptomyces cyaneogriseus
Pathway
scw03030
DNA replication
scw03430
Mismatch repair
scw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TU94_08900
03430 Mismatch repair
TU94_08900
03440 Homologous recombination
TU94_08900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scw03032
]
TU94_08900
03400 DNA repair and recombination proteins [BR:
scw03400
]
TU94_08900
Enzymes [BR:
scw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TU94_08900
DNA replication proteins [BR:
scw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TU94_08900
DNA repair and recombination proteins [BR:
scw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TU94_08900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Tsr1_G-like
Motif
Other DBs
NCBI-ProteinID:
AJP01599
UniProt:
A0A0C5G0F9
LinkDB
All DBs
Position
complement(2207779..2211318)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAQKA
GITPIIGIEAYVAPESRRNKRKILWGQPHQKRDDVSGSGGYTHKTIWAVDSTGLHNLFRL
SSDAYAEGWLQKWPRMDKETIAQWSTGLVASTGCPSGEVQTRLRLGHFDEALKAAADYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEAQAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTEEMYAIDSSDAWQEGCANTRLIAEMVDTTGMFEKRD
LMPKFDIPEGYTEVTWFQEEVRRGMERRYPGGIPEDRMKQAEYEMDVIISMGFPGYFLVV
ADFIMWAKKQGIAVGPGRGSAAGSIVAYALGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRAEVIRYVTEKYGADKVAQIGTYGTIKAKNAIKDSARVLGYPYAMGDRITKAMP
ADVLGKGIPLSGITDPSHPRYSEAGEVRSMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSEPIVDHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGIDIDLLSLPLDDPTTFELLQRGDTLGVFQFDGGPMRSLLRMMKPDNFEDISAVSALY
RPGPMGMNSHINYALRKNGQQEITPIHPELEEPLKEVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFVLFQEGARKKGFSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
EANFAAQGDDVILFGLSAVRNVGTNVVESIIRCRKAKGKYLSFPDYLDKVEAVVCNKRTT
ESLIKAGAFDSMGHTRKGLMAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEEDSSEPGFGL
DVEFSTDEWDKTYLLAQEREMLGLYVSDHPLFGLEHILSDKADAGISQLTGGDFGDGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELMVPDLSNAGTNAPVVLTIPATRVTPPMVSRLGEILTHHKGDSEVRI
KLQGPTRTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaagccgcccttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctgcacggtgcgtacgatttcttccactccgcgcagaaggcc
gggatcaccccgatcatcgggatcgaggcgtatgtcgcgccggagtcgcgccgcaacaag
cgcaagatcctctggggccagccgcaccagaagcgggacgacgtctccggctccggcggc
tacacgcacaagaccatctgggcggtcgacagcacgggcctgcacaacctcttccgcctc
tcctcggacgcctacgccgagggctggctgcagaagtggccccggatggacaaggagacc
atcgcccagtggtccaccgggctcgtcgcctccaccggctgcccctccggcgaggtgcag
acccggctgcgcctcggccacttcgacgaggcgctgaaggcggccgccgactaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacggcctgctggagatcggcaagaagctcggcatccccccgctggtcacc
aacgactcgcactacacctacgcgcacgaggcgcaggcgcacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtcgacggaggagatgtacgccatcgactcctccgacgcctggcaggaggggtgc
gccaacacgcggctgatcgccgagatggtcgacaccaccggcatgttcgagaagcgcgac
ctcatgccgaagttcgacatcccggagggctacaccgaggtcacctggttccaggaggag
gtccgccgcggcatggagcgccgctacccgggcggcatccccgaggaccgcatgaagcag
gccgagtacgagatggacgtcatcatctcgatgggcttccccggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaagcagggcatcgccgtcggccccggccgcggctcc
gcggccggctcgatcgtcgcctacgcgctcggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcatctcgatgcccgatgtcgacatc
gacttcgacgagcgccggcgcgccgaggtgatccggtacgtgaccgagaagtacggcgcc
gacaaggtcgcccagatcggcacctacggcaccatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccgcatcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcccgctgtccggcatcaccgaccccagccacccccgg
tactcggaggcgggcgaggtccgctcgatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgcgcgcggcgtcgagggcctggtgcggcagatgggcgtgcacgccgccggc
gtgatcatgtccagcgagccgatcgtcgaccacgtcccggtctgggtccggcacaccgac
ggcgtcaccatcacgcagtgggactacccgagctgcgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaaggcg
aacaaggggatcgacatcgatctcctcagcctcccgctcgacgacccgaccaccttcgag
ctgctccagcgcggcgacaccctcggcgtcttccagttcgacggcggccccatgcgctcc
ctgctgcgcatgatgaagcccgacaacttcgaggacatctccgccgtctcggccctgtac
cggccgggcccgatgggcatgaactcgcacatcaactacgccctgcgcaagaacggccag
caggagatcacgccgatccacccggagctggaggagccgctcaaggaggtcctggacgtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggc
tactcgctcggcgaggccgacatcctccgccgcgtgatgggcaagaagaagcccgaggag
ctggcgaagaacttcgtcctcttccaggagggcgcccgcaagaagggcttcagcgacgag
gccatccaggcgctgtgggacgtgctggtccccttcgccggctacgccttcaacaaggcg
cactccgccgcgtacggcctggtgtcgtactggacggcgtacctgaaggcgaaccacccc
gccgagtacatggccgcgctgctcacctccgtcaaggacgacaaggacaagtcggccgtc
tacctcaacgagtgccgccgcatgggcatcaaggtgctcccgcccaacgtcaacgagtcc
gaggccaacttcgccgcgcagggcgacgacgtgatcctcttcggcctgtccgcggtgcgc
aacgtcggcaccaacgtggtcgagtcgatcatccggtgccgcaaggccaaggggaagtac
ctctccttccccgactacctcgacaaggtcgaggcggtcgtctgcaacaagcgcaccacc
gaatcgctgatcaaggccggcgccttcgactccatgggccacacccgcaagggcctcatg
gcgcagtacgagcccatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggcgaggaggacagcagcgagcccggcttcgggctg
gacgtggagttctccaccgacgagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggtctgtacgtctccgaccacccgctgttcggcctggagcacatcctgtccgac
aaggccgacgcgggcatctcccagctcaccggcggcgacttcggcgacggcgcggtggtc
accatcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtggaggacctcgccggctccatcgagtgcatgttcttcccggcgacc
taccagctcgtctccacccaactcgtcgaggacgccgtcgtgttcgtcaaggggcgcctg
gacaagcgcgaggacgtgccccggctggtggcgatggagctgatggtccccgacctgtcc
aacgcgggcaccaacgcgcccgtggtgctcaccatcccggccacccgggtcaccccgccc
atggtcagccgcctcggcgagatcctcacccaccacaagggcgacagcgaggtccggatc
aagctccagggcccgaccaggacgacggtgctgcgcctggaccggcaccgggtgaagccc
gacccggccctcttcggcgacctgaaggtgctgctcggcccgtcctgcctggccggttag
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