Streptomyces cyaneogriseus: TU94_11920
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Entry
TU94_11920 CDS
T03687
Name
(GenBank) helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
scw
Streptomyces cyaneogriseus
Pathway
scw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TU94_11920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scw03400
]
TU94_11920
Enzymes [BR:
scw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TU94_11920
DNA repair and recombination proteins [BR:
scw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TU94_11920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
PIF1
PhoH
NPHP3_N
AAA_16
TraI_hel_assoc_N
nSTAND3
DEAD
HTH_IclR
UvrD_C
AAA
ABC_tran
TrwB_AAD_bind
SLFN-g3_helicase
UvrD-helicase
DUF87
Motif
Other DBs
NCBI-ProteinID:
AJP02097
UniProt:
A0A0C5FQ45
LinkDB
All DBs
Position
complement(2906045..2908306)
Genome browser
AA seq
753 aa
AA seq
DB search
MPTQTAAAAPGERKLAVLEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGALLGAQV
GESLRMEGRWGSHPQYGKQFHVENYTTVLPATVQGIRRYLGSGLVKGIGPVFADRITQHF
GLDTLRIIEEEPGRLIEVPGLGPKRTKRIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIY
KKYGDASIFVVKNQPYRLAADVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQSAD
QGNCYLPEERLIADAVKLLQVDTGLVIECLAELAEPPEDGGDPGVVREKVPGPEGDGGEP
VTAVYLVPFHRAELSLAAQLLRLLRTGEDRMPGFREVAWDKALTWLKGRTGADLAPEQEA
AVKLALTEKVAVLTGGPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLSELTGAEA
STVHRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDV
DQLPSVGAGEVLRDLLADGSPIPAVRLTRVFRQAQQSGVVTNAHRINAGQHPVTDGMKDF
FLFVEDDTEEAGRLTVDVAARRIPARFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAIT
PGRPEVPEKRFGGRVFRVGDKVTQIRNNYEKGKNGVFNGTVGVVTSLDPVDQRLTVLTDE
DEEVPYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKL
VVLVGSRRAIGQAVRTVSAGRRCTALDFRLAGP
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccagaccgcagccgccgcccccggtgaacgaaagctcgccgtgctcgaaggc
gtcctggagcgcatcacgtacgccaacgaggagaacggctacacggtcgcccgtgtcgat
accggcagaggcgccggtgacctgctcacggtcgtcggcgcgctgctcggggcccaggtc
ggggagtccctgcgcatggaggggcgctggggctcgcacccgcagtacggcaagcagttc
cacgtggagaactacacgacggtgctgccggccaccgtccagggcatccggcggtacctc
ggctcgggcctggtcaagggcatcggcccggtcttcgccgaccgcatcacccagcacttc
gggttggacacgctgaggatcatcgaggaggagcccgggcggctcatcgaggtgcccggg
ctcggccccaagcggaccaagcggatcgccgacgcctgggaggagcagaaggcgatcaag
gaggtgatgctcttcctccagaccgtcgaggtgtcgacgtcgatcgccgtgcggatctac
aagaagtacggcgacgcctccatcttcgtggtgaagaaccagccgtaccggctcgcggcc
gacgtctggggcatcggcttcctcaccgccgacaagatcgcccagtccgtcggcatcccg
cacgacagccccgaacgcgtcaaggcgggcctacagtacgcgctgtcgcaatccgccgac
cagggcaactgctatctgcccgaggagcggctgatcgccgacgcggtcaagctgctccag
gtcgacaccggcctggtcatcgagtgcctcgccgagctggccgagccgccggaggacggc
ggcgacccgggtgtcgtgcgcgagaaggtgcccggcccggagggcgacggcggggagccg
gtcacggccgtctacctcgtccccttccaccgggccgagctctccctcgccgcccagttg
ctgcgcctgctgcgcaccggcgaggaccggatgcccggcttccgggaggtggcgtgggac
aaggcgctgacctggctgaagggccgtaccggcgccgacctggcccccgagcaggaggcc
gccgtcaagctggcgctgaccgagaaggtcgccgtgctgaccggcggccccggctgcggc
aagtccttcacggtccgctcgatcgtggagctggcccgcgcgaagaaggccaaggtggtg
ctcgccgcgccgaccggccgggccgccaagcgcctgtccgagctgaccggagccgaggcg
tccaccgtccaccggctgctggagctgaagcccggcggtgacgccgcctacgaccgggac
cgcccgctcgacgccgatctggtggtggtcgacgaggcgtccatgctggacctgctgctc
gccaacaagctggtcaaggcggtcccgcccggcgcccacctgctcttcgtcggggacgtg
gaccagctccccagcgtcggcgccggggaggtgctgcgcgacctgctcgccgacggcagc
ccgatcccggccgtgcggctgacgcgcgtcttccgccaggcccagcagtcgggcgtggtc
accaacgcccaccggatcaacgccgggcagcacccggtcaccgacggcatgaaggacttc
ttcctcttcgtcgaggacgacaccgaggaggccggccggctcacggtcgacgtcgccgcc
cgccgcatccccgcccggttcggcctggacccgcgccgcgacgtccaggtgctggccccc
atgcaccggggcccggccggggcgggcaccctcaacggcctcctccagcaggccatcacc
cccggccgccccgaggtgcccgagaagcggttcggcggccgggtcttccgggtcggcgac
aaggtgacccagatccgcaacaattacgagaaagggaagaacggcgtcttcaacggcacc
gtgggtgtggtcacctccctcgacccggtcgaccagcgcctgacggtgctgaccgacgag
gacgaggaggtgccgtacgaattcgacgaactggacgaactggcccacgcctacgcggtg
accatccaccgctcccagggcagcgagtacccggccgtcgtgatcccggtgaccacgggc
gcctggatgatgctccagcgcaatctgctctacacggcggtcacccgcgccaagaagctg
gtggtcctcgtcgggtcgcgccgggcgatcggccaggcggtgcgcacggtctcggcgggc
cggcgctgcacggcgctcgacttccgcctcgcgggcccctga
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