Streptomyces cyaneogriseus: TU94_12225
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Entry
TU94_12225 CDS
T03687
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
scw
Streptomyces cyaneogriseus
Pathway
scw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TU94_12225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scw03019
]
TU94_12225
03009 Ribosome biogenesis [BR:
scw03009
]
TU94_12225
Messenger RNA biogenesis [BR:
scw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TU94_12225
Ribosome biogenesis [BR:
scw03009
]
Eukaryotic type
Pre-60S particles
RNases
TU94_12225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJP02143
UniProt:
A0A0C5FWS8
LinkDB
All DBs
Position
2983709..2984311
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AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGDGVDIVIRPPERALETMPEVVR
QMHTASGLLAELENGTTLADAEERVLAYVKEHVKEPGKAPLCGNSVGTDRGFLLRDMPTL
EDYLHYRIVDVSSIKELARRWYPRAYFNSPQKNGNHRALADIRESIAELRYYREAVFVPQ
PGPDSDTAKAIAARHVLPAE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtccgacgac
gcgctcatcgaggtggccgccctcgtcaccgactccgagctcaacgtgctcggcgacggc
gtggacatcgtcatccgcccgccggagcgggcgctggagacgatgccggaggtggtgcgt
cagatgcacaccgcctcggggctgctcgccgagctggagaacggcacgacgctggcggac
gccgaggagcgggtcctggcgtatgtgaaggagcacgtcaaggagcccggcaaggcgccc
ctgtgcggcaactcggtcggcaccgaccgcggcttcctgctgcgggacatgccgaccctg
gaggactacctccactaccggatcgtcgacgtgtcgtcgatcaaggagctggcccgccgc
tggtacccgagggcgtacttcaacagtccgcagaagaacggcaaccaccgcgcgctcgcc
gacatccgcgagtccatcgccgagctgcgctactaccgcgaggccgtcttcgtcccgcag
cccggccccgactccgacaccgccaaggcgatcgcggcccggcacgtcctgcccgccgag
tag
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