Streptomyces cyaneogriseus: TU94_13435
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Entry
TU94_13435 CDS
T03687
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
scw
Streptomyces cyaneogriseus
Brite
KEGG Orthology (KO) [BR:
scw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scw03021
]
TU94_13435
Transcription machinery [BR:
scw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TU94_13435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_24
HTH_3
MarR_2
DUF8073_C
GerE
KORA
DnaB_bind
DUF7343
MarR
IF2_N
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
AJP02332
UniProt:
A0A0C5FQM7
LinkDB
All DBs
Position
3266430..3267356
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AA seq
308 aa
AA seq
DB search
MEDIMSPRLDGSRTHKATSTPPPEHLDPIEQQDEGAAYDGALAGLPDIPAYDEVAPADAR
ALSKTLFERLESLEEGTYDYAYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGL
IKAIDRFELSRGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQ
QLDRSPTVAELAERLGISNEEVVEGMAASNAYTASSLDAQPEEDDSEGTLADRIGYEDHG
LEGIEYVESLKPLIAELPSRDRKILSLRFVAGMTQSEIGDELGISQMHVSRLLSRTLVRL
RKGLTVEE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcatgtcaccccggctcgacggatcgcgtacccacaaagcgacgtcgaca
ccccctccggaacatctggatcccatcgagcagcaggacgaaggtgccgcgtacgacggc
gcactcgccgggcttccggacatccccgcgtacgacgaggtggctccggcggacgcccgg
gccctgtccaagaccctcttcgagcggctggagtcgctggaggaaggcacctatgactat
gcgtacgtccgcaacacgctggtcgaactgaacctcgccctggtgaagttcgcggcctcc
cgcttccgctcgcgcagcgagccgatggaggacatcatccaggtcggcacgatcggcctg
atcaaggcgatcgaccgcttcgagctctcccgcggcgtggagttcccgaccttcgcgatg
ccgaccatcatcggcgagatcaagcggttcttccgcgacacctcgtggtccgtgcgggtc
ccgcgccggctccaggaactccggctcgacctggccaaggccggcgacgagctggcccag
cagctcgaccgctccccgaccgtggccgaactggccgagcgcctcggcatctccaacgag
gaggtggtcgagggcatggcggcctcgaacgcgtacaccgcctcctcgctggacgcccag
ccggaggaggacgacagcgagggcacgctcgcggaccggatcggctacgaggaccacggg
ctcgagggcatcgagtacgtcgagtcgctcaagccgctgatcgccgaactcccctcgcgg
gaccggaagatcctctccctgcgtttcgtcgccggcatgacccagtcggagatcggcgac
gagctcggcatctcccagatgcacgtctcccggctgctgtcgcgcacgctggtgcggctg
cgcaaggggctcacggtcgaggagtga
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