Streptomyces cyaneogriseus: TU94_18545
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Entry
TU94_18545 CDS
T03687
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
scw
Streptomyces cyaneogriseus
Brite
KEGG Orthology (KO) [BR:
scw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scw03016
]
TU94_18545
Enzymes [BR:
scw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
TU94_18545
Transfer RNA biogenesis [BR:
scw03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
TU94_18545
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AJP03176
UniProt:
A0A0C5GFL5
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All DBs
Position
4405763..4406335
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AA seq
190 aa
AA seq
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MRLFAAVLPPDEAIRSLAAEVDRLKRLPGADGLRWTGRPGWHLTLAFYGEVDDTLVPDLS
ERLARAAHRTPPFGLALSGGGQFGRGRALWAGAEGDLRTLALLADRAEAAGRKAGVEMGE
HRRYKAHLTVARGREAIDPGPFVDALADFAGPAWTVAELALVRSNLPRSANAGERPRYEA
VGRWPLGASG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgccgccgtgctgccccccgacgaggcgatccggtcgctcgccgccgag
gtcgaccggctgaagcggctgcccggcgcggacgggctgcgctggaccggccgcccgggc
tggcacctcaccctcgcgttctacggcgaggtcgacgacaccctcgtaccggatctgtcg
gagcgcctggcgcgggccgcccaccgcaccccgcccttcgggctggccctgagcggcggc
ggccagttcggccggggccgcgccctgtgggcgggggccgagggggacctgcgcaccctg
gcgctgctggccgaccgtgccgaggcggccgggcgcaaggcgggcgtggagatgggggag
caccgccggtacaaggcccacctgacggtggcgcgcggccgggaggcgatcgacccgggc
cccttcgtcgacgccctcgcggacttcgccggtcccgcatggacggtggcggagctggcc
ctggtccgcagcaacctgccgaggtccgcgaacgcgggcgagcggccccgctacgaggcg
gtcggccgctggccgctgggcgcgtccggttag
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